Commits · 992171995bfed6dd2e406fb0f073f1b0987369dc · SVdetection / popsim

May 17, 2017
- Fix if no genotype was given · 99217199
  Floreal Cabanettes authored 7 years ago
  
  99217199
- simplified sort · 35108d71
  Thomas Faraut authored 7 years ago
  
  35108d71
May 05, 2017
- Use mkdtemp to create temp dir + add try-except to fix bug on missing files · 3ef5dbea
  Floreal Cabanettes authored 7 years ago
  
  3ef5dbea
Apr 20, 2017
- Add colors to boxplots · b81d3288
  Floreal Cabanettes authored 7 years ago
  
  b81d3288
Apr 19, 2017
- merge all quality PDFs in a single one, with bookmarks · 7f2d935d
  Floreal Cabanettes authored 8 years ago
  
  7f2d935d
- Fix figures for full NA values · d1286c6e
  Floreal Cabanettes authored 8 years ago
  
  d1286c6e
- Add haploid support to R figures · 0fb175af
  Floreal Cabanettes authored 8 years ago
  
  0fb175af
- Fix build pop script · 3790e7da
  Floreal Cabanettes authored 8 years ago
  
  3790e7da
- Fix build pop for diploids · 66b4bcfc
  Floreal Cabanettes authored 8 years ago
  
  66b4bcfc
- Fix python syntax · 0b04ea0a
  Floreal Cabanettes authored 8 years ago
  
  0b04ea0a
- Add options to reads generation · 9d7bc75d
  Floreal Cabanettes authored 8 years ago
  
  9d7bc75d
Apr 14, 2017
- svreader as submodule (lib) · 23f09bd7
  Floreal Cabanettes authored 8 years ago
  
  23f09bd7
Apr 12, 2017
- Add precision and recall graphs · 812cdbec
  Floreal Cabanettes authored 8 years ago
  
  812cdbec
Apr 10, 2017
- Merge graphics by tool + png -> pdf · 128e9145
  Floreal Cabanettes authored 8 years ago
  
  128e9145
- Add build of R figures · b855a687
  Floreal Cabanettes authored 8 years ago
  
  b855a687
Apr 07, 2017
- Fix genotypes for orphans records · 35a6b63b
  Floreal Cabanettes authored 8 years ago
  
  35a6b63b
- Make Excel file optional · 9309b55b
  Floreal Cabanettes authored 8 years ago
  
  9309b55b
- Rename build results script · 761c6d2a
  Floreal Cabanettes authored 8 years ago
  
  761c6d2a
- Add tsv outputs + change colors · 73d5978e
  Floreal Cabanettes authored 8 years ago
  
  73d5978e
- Add haploid option · c40e6856
  Floreal Cabanettes authored 8 years ago
  
  c40e6856
Apr 06, 2017
- Bgzip+tabix genotypes simulated vcf file · 2e9b9abb
  Floreal Cabanettes authored 8 years ago
  
  2e9b9abb
- Add vawk · cbc36628
  Floreal Cabanettes authored 8 years ago
  
  cbc36628
- Add genotype quality + code refactoring · 91cf5217
  Floreal Cabanettes authored 8 years ago
  
  91cf5217
Apr 04, 2017
- Add genotypes comparison + resize columns · a96b9922
  Floreal Cabanettes authored 8 years ago
  
  a96b9922
Apr 03, 2017
- Fix build_jflow_command_line script · 410e18aa
  Floreal Cabanettes authored 8 years ago
  
  410e18aa
- Fixbuild_jflow_command_line script · b739eeb9
  Floreal Cabanettes authored 8 years ago
  
  b739eeb9
- Add res dir to build_jflow_command_line script · 3d75a068
  Floreal Cabanettes authored 8 years ago
  
  3d75a068
Mar 31, 2017
- Fix bug · 80c40cc4
  Floreal Cabanettes authored 8 years ago
  
  80c40cc4
- Add requirements in README · 415d03b8
  Floreal Cabanettes authored 8 years ago
  
  415d03b8
- Remove unused imports · f3d17edf
  Floreal Cabanettes authored 8 years ago
  
  f3d17edf
- SVsim for python3 (thanks to T. Faraut) + remove unused imports · 157ac87b
  Floreal Cabanettes authored 8 years ago
  
  157ac87b
- Update README · 76cb66b6
  Floreal Cabanettes authored 8 years ago
  
  76cb66b6
- Add build XLS results file · ac5c9b18
  Floreal Cabanettes authored 8 years ago
  
  ac5c9b18
Mar 27, 2017
- Build jflow commands: use absolute paths · 11787d03
  Floreal Cabanettes authored 8 years ago
  
  11787d03
- Add update instructions · 3a2e137b
  Floreal Cabanettes authored 8 years ago
  
  3a2e137b
- Force polymorphism is now optional · 6bf39874
  Floreal Cabanettes authored 8 years ago
  
  6bf39874
- Add limitations and external programs paragraphes · 83928951
  Floreal Cabanettes authored 8 years ago
  
  83928951
- Add README file · 91a36e75
  Floreal Cabanettes authored 8 years ago
  
  91a36e75
Mar 24, 2017
- Remove pirs patch (useless) · c56dcb53
  Floreal Cabanettes authored 8 years ago
  
  c56dcb53
- Add pirs patch · 4ab00ea8
  Floreal Cabanettes authored 8 years ago
  
  4ab00ea8