Dépôt publique de documentation de référence sur logiciels, méthodes ou pratiques pour les chercheurs, collaborateurs et étudiants de l'UMR ASTRE. Contact : facundo.munoz@cirad.fr

Exploitation et maintenance du thésaurus INRAE, thésaurus ouvert et partagé couvrant les domaines de recherche d’INRAE. Il sert de référentiel au sein de l’institut pour indexer et annoter des documents, pages web, descriptions d’activités, jeux de d

Some templates useful for Gitlab CI Yaml scripts.

An R package with globally useful function for UREP R developments

R functions used in Gitlab CI Templates

A Gitlab project template for an R package. Use it as a base for a new R package project. See README for details.

A Python scripting interface for CB-Geo MPM

Seine River Basin modelling

PAPPSOms++ is a comprehensive C++ library including useful functions to handle mass spectrometric data, either in a proteomics setting or for data visualization. Abstractions include peptides, proteins, isotopic clusters, mass/drift spectra...

MassChroQ (Mass Chromatogram Quantification) is a powerful and versatile software that performs retention time alignment, XIC extraction, peak detection and quantification on data obtained from liquid chromatography-mass spectrometry techniques.

The aim of this project is to provide an R package for big integer (and big rational) computations. This is achieved via an C++ interface to the GNU MP ("GMP") library, and S3 classes "bigz", "bigq", etc.

Meteor (Metagenomic Explorator), a software for profiling metagenomic data at gene level

Package R with a shiny interface to run an interactive differential gene/region expression analysis.

VGEST wrapper R package

A presentation and day book area.