Fix build pop for diploids

build_pop.py

@@ -226,7 +226,7 @@ print("GENERATE RANDOM READS FOR EACH INDIVIDUAL FROM GENOME...\n")
 # Generate reads for all individuals:
 if not haploid:
     cmd = str("{4}pirs/pirs simulate -z -x {3} -d -B {4}pirs/Profiles/Base-Calling_Profiles/humNew.PE100.matrix.gz "
-              "-I {4}pirs/Profiles/InDel_Profiles/phixv2.InDel.matrix "
+              "-I {4}pirs/Profiles/InDel_Profiles/phixv2.InDel.matrix -l {5} -m {6} -v {7}"
               "-G {4}pirs/Profiles/GC-depth_Profiles/humNew.gcdep_100.dat -o {0} {1} {2}")
 else:
     cmd = str("{4}pirs/pirs simulate -z -x {3} -B {4}pirs/Profiles/Base-Calling_Profiles/humNew.PE100.matrix.gz "