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genotoul-bioinfo / D-GENIES
GNU General Public License v3.0 or laterDotplot large Genomes in an Interactive, Efficient and Simple way
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List of workflows (nextflow/snakemake) tested for Genotoul Cluster.
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A standalone version of the function performing dynamic programming in a band
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Depot publique pour les outils de gestion de code lié à la plateforme Record
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Mathieu Buoro / Abondance
GNU General Public License v3.0 onlyMise à jour et standardisation des séries chronologiques d'abondance du saumon atlantique sur les cours d'eau de l'ORE DiaPFC
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urgi-is / data-discovery
Creative Commons Attribution 4.0 InternationalDataDiscovery aims at providing researchers a simple and fast access to relevant biological data using specific keywords and easy to use filters.
This tool is expected to be easily customizable for specific filters, environments, or data schemas.
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The aim of this project is to provide an R package for big integer (and big rational) computations. This is achieved via an C++ interface to the GNU MP ("GMP") library, and S3 classes "bigz", "bigq", etc.
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Vincent Negre / kernel
BSD 3-Clause "New" or "Revised" LicenseUpdated -
Hugo Chauvet-Thiry / RootStemExtractor
GNU General Public License v3.0 onlyThe development of RootStemExtractor has been moved to https://forgemia.inra.fr/felix.hartmann/interekt
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toolbar is an exact discrete optimization tool for graphical models. For most use cases, it has been obsoleted by toulbar2 (on GitHub).
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A library of Cost Function Networks and other graphical model instances (MRF, PWMaxSat,...).
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Gauthier Quesnel / baryonyx
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Ensemble de scripts utilisés au LRF pour traiter les données d'amplicon sequencing 16S et ITS.
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urgi-is / FAIDARE
Creative Commons Attribution 4.0 InternationalFAIDARE: FAIR Data-finder for Agronomic Research
It provides web services (based on the BrAPI standard) and a web interface with easy to use filters to facilitates the access to plant datasets from a federation of sources.
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