List of workflows (nextflow/snakemake) tested for Genotoul Cluster.

Next Generation Sequencing Information System

ViSEAGO: Easier data mining of biological functions organized into clusters using Gene Ontology and semantic similarity. Visualization, Semantic similarity and Enrichment Analysis of Gene Ontology.

Generate a population of individuals with SV, with paried end reads for each

Ensemble de scripts utilisés au LRF pour traiter les données d'amplicon sequencing 16S et ITS.

mechanistic-statistical environement

Base docker image for Rare project

The DAIRYdb is a manually curated database, composed of complete rRNA 16S sequences from bacteria found in cheese and dairy products. It improves taxonomic assignment of sequences produced from 16S amplicon sequencing.