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Contribution à la réalisation du "pilote" INRAE, dans le cadre du programme européen GraspOS

MassChroQ (Mass Chromatogram Quantification) is a powerful and versatile software that performs retention time alignment, XIC extraction, peak detection and quantification on data obtained from liquid chromatography-mass spectrometry techniques.

Some terminal utilities for Yoctopuce modules

the ontology to describe the interaction between organisms and cultivated plants

React JS App created by Vite

This project aims to create a opensilex instance running on docker-compose stack

A library of Cost Function Networks and other graphical model instances (MRF, PWMaxSat,...).

Source code of the GRYC website (http://gryc.inrae.fr).

code R pour le calcul des valeurs de shapley d'un modèle d'apprentissage dans le cadre de la cartographie

metagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. Since release 2.3, binning step with the possibility of cross-alignment is included. It has been developed in collaboration with several CATI BIOS4biol agents. Funded by Antiselfish Project (Labex Ecofect), ExpoMicoPig project (France Futur elevage) and SeqOccIn project (CPER - Occitanie Toulouse / FEDER), ATB_Biofilm funded by PNREST Anses, France genomique (ANR-10-INBS-09-08) and Resalab Ouest.

Pipeline Nextflow

Logiciel de saisie des pêches scientifiques a chalut réalisées dans l'estuaire de la Gironde

Java library for metabolic networks

DataDiscovery aims at providing researchers a simple and fast access to relevant biological data using specific keywords and easy to use filters.

This tool is expected to be easily customizable for specific filters, environments, or data schemas.

GroupingProtein does filtering, protein inference and grouping of mass MS/MS identification result (thousands of samples, high resolution mass spectrometers)