Next Generation Sequencing Information System

Materials for ENAC course on graphs and networks. It contains slides and practical exercices for the course. A list of past exams is also available.

A presentation and day book area.

ViSEAGO: Easier data mining of biological functions organized into clusters using Gene Ontology and semantic similarity. Visualization, Semantic similarity and Enrichment Analysis of Gene Ontology.

A python module to explore and use the agroecoperenne database

A library of Cost Function Networks and other graphical model instances (MRF, PWMaxSat,...).

Portabilité et mises en commun de workflows

We introduce jflow, a Workflow Management System (WMS), composed of Jquery plugins which can easily be embedded in any WEB application and a Python library providing all requested features to setup, run and monitor workflows.

Ensemble de scripts utilisés au LRF pour traiter les données d'amplicon sequencing 16S et ITS.

Dépôt public de documentations pour les utilisateurs de ForgeMIA. Contact : support-forgemia@inra.fr

mechanistic-statistical environement

Python code to map metabolites (including lipids) to metabolic networks using ontology.