Commits · a60719b5b3391091131227f99c485d6af523c0b5 · SVdetection / popsim

Jun 20, 2017
- Generate deletions positions and size with our algorithm instead of SVSim · a60719b5
  Floreal Cabanettes authored 7 years ago
  
  a60719b5
Jun 15, 2017
- Complete README · 38a86042
  Floreal Cabanettes authored 7 years ago
  
  38a86042
- Add stripplots option · dd063081
  Floreal Cabanettes authored 7 years ago
  
  dd063081
- Build figures using python without R · 0e4ecb7c
  Floreal Cabanettes authored 7 years ago
  
  0e4ecb7c
- Fix main function · e045a8a6
  Floreal Cabanettes authored 7 years ago
  
  e045a8a6
Jun 13, 2017
- Fix code · 4ad4b4c6
  Floreal Cabanettes authored 7 years ago
  
  4ad4b4c6
- xlsxwriter as optional dependency · 358f6d4c
  Floreal Cabanettes authored 7 years ago
  
  358f6d4c
Jun 09, 2017
- Remove unused check · 62de38ec
  Floreal Cabanettes authored 7 years ago
  
  62de38ec
- Exit if output dir exists · 2e6ff9d5
  Floreal Cabanettes authored 7 years ago
  
  2e6ff9d5
- refactoring · 11f5eaa5
  Floreal Cabanettes authored 7 years ago
  
  11f5eaa5
- refactoring · 139946d6
  Floreal Cabanettes authored 7 years ago
  
  139946d6
- Refactoring of build_pop script · fa876d5b
  Floreal Cabanettes authored 7 years ago
  
  fa876d5b
Jun 07, 2017
- Update requirements · 8d6c7883
  Floreal Cabanettes authored 7 years ago
  
  8d6c7883
May 30, 2017
- Update README · fb6dac8b
  Floreal Cabanettes authored 7 years ago
  
  fb6dac8b
May 17, 2017
- Fix if no genotype was given · 99217199
  Floreal Cabanettes authored 7 years ago
  
  99217199
- simplified sort · 35108d71
  Thomas Faraut authored 7 years ago
  
  35108d71
May 05, 2017
- Use mkdtemp to create temp dir + add try-except to fix bug on missing files · 3ef5dbea
  Floreal Cabanettes authored 7 years ago
  
  3ef5dbea
Apr 20, 2017
- Add colors to boxplots · b81d3288
  Floreal Cabanettes authored 7 years ago
  
  b81d3288
Apr 19, 2017
- merge all quality PDFs in a single one, with bookmarks · 7f2d935d
  Floreal Cabanettes authored 8 years ago
  
  7f2d935d
- Fix figures for full NA values · d1286c6e
  Floreal Cabanettes authored 8 years ago
  
  d1286c6e
- Add haploid support to R figures · 0fb175af
  Floreal Cabanettes authored 8 years ago
  
  0fb175af
- Fix build pop script · 3790e7da
  Floreal Cabanettes authored 8 years ago
  
  3790e7da
- Fix build pop for diploids · 66b4bcfc
  Floreal Cabanettes authored 8 years ago
  
  66b4bcfc
- Fix python syntax · 0b04ea0a
  Floreal Cabanettes authored 8 years ago
  
  0b04ea0a
- Add options to reads generation · 9d7bc75d
  Floreal Cabanettes authored 8 years ago
  
  9d7bc75d
Apr 14, 2017
- svreader as submodule (lib) · 23f09bd7
  Floreal Cabanettes authored 8 years ago
  
  23f09bd7
Apr 12, 2017
- Add precision and recall graphs · 812cdbec
  Floreal Cabanettes authored 8 years ago
  
  812cdbec
Apr 10, 2017
- Merge graphics by tool + png -> pdf · 128e9145
  Floreal Cabanettes authored 8 years ago
  
  128e9145
- Add build of R figures · b855a687
  Floreal Cabanettes authored 8 years ago
  
  b855a687
Apr 07, 2017
- Fix genotypes for orphans records · 35a6b63b
  Floreal Cabanettes authored 8 years ago
  
  35a6b63b
- Make Excel file optional · 9309b55b
  Floreal Cabanettes authored 8 years ago
  
  9309b55b
- Rename build results script · 761c6d2a
  Floreal Cabanettes authored 8 years ago
  
  761c6d2a
- Add tsv outputs + change colors · 73d5978e
  Floreal Cabanettes authored 8 years ago
  
  73d5978e
- Add haploid option · c40e6856
  Floreal Cabanettes authored 8 years ago
  
  c40e6856
Apr 06, 2017
- Bgzip+tabix genotypes simulated vcf file · 2e9b9abb
  Floreal Cabanettes authored 8 years ago
  
  2e9b9abb
- Add vawk · cbc36628
  Floreal Cabanettes authored 8 years ago
  
  cbc36628
- Add genotype quality + code refactoring · 91cf5217
  Floreal Cabanettes authored 8 years ago
  
  91cf5217
Apr 04, 2017
- Add genotypes comparison + resize columns · a96b9922
  Floreal Cabanettes authored 8 years ago
  
  a96b9922
Apr 03, 2017
- Fix build_jflow_command_line script · 410e18aa
  Floreal Cabanettes authored 8 years ago
  
  410e18aa
- Fixbuild_jflow_command_line script · b739eeb9
  Floreal Cabanettes authored 8 years ago
  
  b739eeb9