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A standalone version of the function performing dynamic programming in a band
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The computer-model tool CRASH (Crops Rotation and Allocation Simulator using Heuristics) aims at helping technical advisors in supporting farmers in their choices and anticipating agricultural water needs depending on crop acreage.
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R'MES is a tool for studying word frequencies in biological sequences.
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Produce an epidemiological risk map by weighting multiple risk factors. https://umr-astre.pages.mia.inra.fr/mapMCDA/
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A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the REPET package.
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Multiple is a program for de novo discovery of DNA motifs corresponding to Transcription Factor binding sites based on a probabilistic model of the DNA sequence that incorporates expression data as covariates.
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Lightweight C++ and Java library to produce Open Document Spreadsheet (.ods) files. The main goal is to write data as simply as writing it to a simple text file (csv or tsv). Libodsstream allows yout to read and write ODS files as stream
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set of usefull mass spectrometry and proteomics utilities used by the PAPPSO team (http://pappso.inra.fr/). Get ion tables from peptides, SVG drawings of MS/MS annotated spectrum, expected intensity ratio of isotopes from a peptide....
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A clone of the PMRF code (MIT licence) to be able to add some minor bells and whistles for symmetry handling
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PAPPSOms++ is a comprehensive C++ library including usefull functions to handle proteomics data (spectrum, peptides, ions, isotopes).
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Construction and Analysis of Protein-Protein Interactions (PPI) NETWORKS for complexes and biological processes
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App Nextcloud permettant de publier des fichiers du Nextcloud INRAE vers DataINRAE
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Meteor (Metagenomic Explorator), a software for profiling metagenomic data at gene level
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