R-package
Projects with this topic
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Analyse mark-release-recapture data from Sterile Insect Technique (SIT) field experiments. https://umr-astre.pages.mia.inra.fr/sit
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Produce an epidemiological risk map by weighting multiple risk factors. https://umr-astre.pages.mia.inra.fr/mapMCDA/
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The SeSAM R package allows fully automatic construction of two successive genetic maps: a first one including an optimized subset of markers ensuring the robustness of orders to a given statistical threshold, and a second one including almost all polymorphic markers. It can handle all common types of biparental mapping populations, including progenies obtained from crossing heterozygous parents. In addition to the automatic procedure, SeSAM includes many functions for interactive mapping, file formats conversions, and generates many graphs useful to assess the quality of data and maps.
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Requirements and design of a R package for analysing data from Mark-Capture-Recapture experiments for the effective management of invasive Aedes mosquitoes.
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R package for modelling arthropod development rates (mean and variance) as a function of temperature in nimble. Adapted from the PhD work of Soledad Castano (http://www.theses.fr/223623849).
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Networks/graphs with geo-localised nodes https://umr-astre.pages.mia.inra.fr/geonetwork/
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Estimate the spread-rate of epidemics https://umr-astre.pages.mia.inra.fr/spreadrate/