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BATARDIERE Bastien / pyPLNmodels
MIT LicenseUpdated -
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metagenopolis / ESKRIM
GNU General Public License v3.0 onlyESKRIM: EStimate with K-mers the RIchness in a Microbiome
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GeT-nextflow-NGL-Bi / wf-Illumina-nf
CeCILL Free Software License Agreement v2.1Pipeline Nextflow
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Scanner3D / AnalyseMorphologique
MIT LicenseUpdated -
Ludovic Mailleret / multi_page_app_pop_dyn
GNU General Public License v3.0 or laterbasis for development of interactive population dynamics web applications
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Félix Hartmann / XyDyS
GNU General Public License v3.0 onlyXyDyS (Xylogenesis Dynamics Simulator) is a software for interactive exploration of computational models of wood formation.
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ICEscreen detects and annotates ICEs (Integrative and Conjugative Elements) and IMEs (Integrative and Mobilizable Elements) in Firmicutes genomes.
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GQE-ABISoft / SHiNeMaS
GNU Affero General Public License v3.0SHiNeMaS is a database with its web interface, dedicated to the management of the history of seed lots and related data like phenotyping, environment and cultural practices. SHiNeMaS is freely available under GNU Affero GPL Licence
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IRHS-Bioinfo / BiSePS
MIT LicenseBisulfite Sequencing Processing Software : Snakemake Pipeline
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PAPPSO / xtpcpp
GNU General Public License v3.0 onlyX!TandemPipeline is a free software (GPL v3) that helps you to filter and group your peptide/protein identifications from MS/MS mass spectra.
Publication: J. Proteome Res. 2017, 16, 2, 494–503 -- https://doi.org/10.102
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genotoul-bioinfo / jvenn
Otherjvenn is a plug-in for the jQuery Javascript library. It is a flexible tool, based upon the venny tool first developed by J.C Oliveros (Oliveros, J.C (2007) VENNY, An integrative tool for comparing lists with Venn Diagrams).
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Cedric Midoux / workflow_metagenomics
GNU Affero General Public License v3.0Updated -
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mixKernel is a multiple kernel framework that allows to integrate multiple datasets of various types into a single analysis. The package is published on CRAN: https://cran.r-project.org/package=mixKernel
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Yannick Lippi / MA_Trix_App
GNU General Public License v3.0 onlyUpdated