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GQE-ABISoft / Thaliadb
GNU Affero General Public License v3.0Updated -
GQE-ABISoft / DiverCILand
GNU Affero General Public License v3.0Updated -
BATARDIERE Bastien / pyPLNmodels
MIT LicenseUpdated -
seqOccIn / HiFi metabarcoding analysis
GNU General Public License v3.0 or laterUpdated -
ICEscreen detects and annotates ICEs (Integrative and Conjugative Elements) and IMEs (Integrative and Mobilizable Elements) in Firmicutes genomes.
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GQE-ABISoft / SHiNeMaS
GNU Affero General Public License v3.0SHiNeMaS is a database with its web interface, dedicated to the management of the history of seed lots and related data like phenotyping, environment and cultural practices. SHiNeMaS is freely available under GNU Affero GPL Licence
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IRHS-Bioinfo / BiSePS
MIT LicenseBisulfite Sequencing Processing Software : Snakemake Pipeline
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PAPPSO / xtpcpp
GNU General Public License v3.0 onlyX!TandemPipeline is a free software (GPL v3) that helps you to filter and group your peptide/protein identifications from MS/MS mass spectra.
Publication: J. Proteome Res. 2017, 16, 2, 494–503 -- https://doi.org/10.102
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Ludovic Mailleret / multi_page_app_pop_dyn
GNU General Public License v3.0 or laterbasis for development of interactive population dynamics web applications
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Cedric Midoux / workflow_metagenomics
GNU Affero General Public License v3.0Updated -
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mixKernel is a multiple kernel framework that allows to integrate multiple datasets of various types into a single analysis. The package is published on CRAN: https://cran.r-project.org/package=mixKernel
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Sandra Pelletier / transcriptomic_analysis_ed-vaam
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
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ISDM-FORMATION / Formation-Introduction-Deep-Learning
Creative Commons Zero v1.0 UniversalNotebook for the Deep learning formation
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NMF4Metagenomics / PyNMF
GNU General Public License v3.0 or laterUpdated -
asm4pg / GenomAsm4pg
GNU Affero General Public License v3.0Updated -
SHERMAN David James / tango_models
GNU General Public License v3.0 or laterUpdated -
scripts to remap markers as pairs of bait sequences or context sequences.
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