Commits · 044885e081a3f1ef01229f1f4b30226207571b8a · SVdetection / popsim

Mar 27, 2018
- Fix variantfile as pysam · 044885e0
  Floreal Cabanettes authored 7 years ago
  
  044885e0
- Fix argument · f23bb80b
  Floreal Cabanettes authored 7 years ago
  
  f23bb80b
- Add type of variant as input · fdd36918
  Floreal Cabanettes authored 7 years ago
  
  fdd36918
- Fix: add break line · a746f623
  Floreal Cabanettes authored 7 years ago
  
  a746f623
- Fix var · a1aea2b9
  Floreal Cabanettes authored 7 years ago
  
  a1aea2b9
- Fix · 823b5f64
  Floreal Cabanettes authored 7 years ago
  
  823b5f64
- Fix performances · 059d4a82
  Floreal Cabanettes authored 7 years ago
  
  059d4a82
- Fix typo · 02f90fda
  Floreal Cabanettes authored 7 years ago
  
  02f90fda
- Add genotype_results script (new implementation based on T. Faraut script) · ea770be0
  Floreal Cabanettes authored 7 years ago
  
  ea770be0
Mar 26, 2018
- Fix paths · 794af239
  Floreal Cabanettes authored 7 years ago
  
  794af239
- Replace output prefix by output folder · 2aec4315
  Floreal Cabanettes authored 7 years ago
  
  2aec4315
- Fix argument · e2fab6d8
  Floreal Cabanettes authored 7 years ago
  
  e2fab6d8
- Make type argument required · 48899c05
  Floreal Cabanettes authored 7 years ago
  
  48899c05
- Fix argparse · 8cac68e8
  Floreal Cabanettes authored 7 years ago
  
  8cac68e8
- Ad type of variant to build_results script · 6e6d44c1
  Floreal Cabanettes authored 7 years ago
  
  6e6d44c1
- Replace arguments file by a file containing list of files · 0f6750eb
  Floreal Cabanettes authored 7 years ago
  
  0f6750eb
- Make build_results working with the new snk pipeline · 3437a5dd
  Floreal Cabanettes authored 7 years ago
  
  3437a5dd
Mar 23, 2018
- Fix printer · 21e1c0c4
  Floreal Cabanettes authored 7 years ago
  
  21e1c0c4
- Fix code · 1d8bbbcd
  Floreal Cabanettes authored 7 years ago
  
  1d8bbbcd
- If quiet, save confirm in txt file · c9fe9ddf
  Floreal Cabanettes authored 7 years ago
  
  c9fe9ddf
- Fix README · e4a46c89
  Floreal Cabanettes authored 7 years ago
  
  e4a46c89
- Fix for pysam 0.14: sort vcf file · eb624401
  Floreal Cabanettes authored 7 years ago
  
  eb624401
Nov 15, 2017
- Fix README · 527b9bce
  Floreal Cabanettes authored 7 years ago
  
  527b9bce
- Fix README · c04c7f7b
  Floreal Cabanettes authored 7 years ago
  
  c04c7f7b
- Remove README text, add pdf version · 45850a01
  Floreal Cabanettes authored 7 years ago
  
  45850a01
- Fix README · 6bac2437
  Floreal Cabanettes authored 7 years ago
  
  6bac2437
- Fix README · 87c3b7c2
  Floreal Cabanettes authored 7 years ago
  
  87c3b7c2
- Fix README · b68358cd
  Floreal Cabanettes authored 7 years ago
  
  b68358cd
- Fix README · 3768eb17
  Floreal Cabanettes authored 7 years ago
  
  3768eb17
- Fix README · 06046539
  Floreal Cabanettes authored 7 years ago
  
  06046539
- Add markdown version for README · 1399a5b5
  Floreal Cabanettes authored 7 years ago
  
  1399a5b5
- Reformat README · ee4cc926
  Floreal Cabanettes authored 7 years ago
  
  ee4cc926
- Reformat README · 3a2550ad
  Floreal Cabanettes authored 7 years ago
  
  3a2550ad
- Fix URL for clone to new repo · 09935f72
  Floreal Cabanettes authored 7 years ago
  
  09935f72
Nov 03, 2017
- Fix a lot of bugs · f0bb4653
  Floreal Cabanettes authored 7 years ago
  
  f0bb4653
Nov 02, 2017
- Fix inversions: reverse complement · 86c8c0be
  Floreal Cabanettes authored 7 years ago
  
  86c8c0be
Oct 26, 2017
- Build results/figures: genotype and filtered results ignored · 0ac88db1
  Floreal Cabanettes authored 7 years ago
  
  0ac88db1
- Add inversions simulations · 6737fa62
  Floreal Cabanettes authored 7 years ago
  
  6737fa62
Sep 15, 2017
- Some fixes, and set ylim 0-100 for recall figure · 9203fae4
  Floreal Cabanettes authored 7 years ago
  
  9203fae4
Sep 12, 2017
- Change None genotype to be N/N · 06baa18f
  Floreal Cabanettes authored 7 years ago
  
  06baa18f