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Commit e2fab6d8 authored by Floreal Cabanettes's avatar Floreal Cabanettes
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Fix argument

parent 48899c05
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......@@ -835,7 +835,7 @@ def init(output, vcf_files, true_vcf, filtered_vcfs=None, type_v="del", overlap_
filtered_records = []
for filtered_vcf in filtered_vcfs:
eprint(" Reading file %s" % filtered_vcf)
filtered_records += read_vcf_file(filtered_vcf)[1]
filtered_records += read_vcf_file(filtered_vcf, type_v)[1]
genotypes, gt_quality, nb_inds = get_genotypes(filtered_vcfs, true_vcf)
do_genotype = True
......
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