Commits · 94563be7b85f9e4639158f10bce3cfb737e5f114 · PAPPSO / i2MassChroQ

Oct 10, 2012

valot authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@322 b8ef2a07-7df7-436f-90b9-41648038564b

94563be7

ant file generated by cmake · d901c4c6

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@321 b8ef2a07-7df7-436f-90b9-41648038564b

d901c4c6

jnlp with mascotdatfile 3.3 · c2a944f7

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@320 b8ef2a07-7df7-436f-90b9-41648038564b

c2a944f7

compile args · 5f19547e

langella authored 12 years ago

confdir

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@319 b8ef2a07-7df7-436f-90b9-41648038564b

5f19547e

Sep 18, 2012

fixed xml namespace declaration · 6683b5c0

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@318 b8ef2a07-7df7-436f-90b9-41648038564b

6683b5c0

Aug 23, 2012

new mascotdatfile library · e098948f

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@317 b8ef2a07-7df7-436f-90b9-41648038564b

e098948f

delete uneeded file · dec4e7a0

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@316 b8ef2a07-7df7-436f-90b9-41648038564b

dec4e7a0

CMakeList modified to improve debian package build · 2ec6dbdb

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@315 b8ef2a07-7df7-436f-90b9-41648038564b

2ec6dbdb

Aug 21, 2012

replace devoy by decoy · ab9bf0d2

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@314 b8ef2a07-7df7-436f-90b9-41648038564b

ab9bf0d2

Jul 10, 2012

new PROTICdbMLWriter · 0227eaf3

langella authored 12 years ago

deleting old MassChroQml Writer

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@313 b8ef2a07-7df7-436f-90b9-41648038564b

0227eaf3

Jun 22, 2012

Corrected link to xtandem executable and java download · 2bc432a4

valot authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@312 b8ef2a07-7df7-436f-90b9-41648038564b

2bc432a4

Jun 08, 2012

Update changelog on documentation · e753ffd0

valot authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@311 b8ef2a07-7df7-436f-90b9-41648038564b

e753ffd0

Jun 07, 2012

xtandempipeline (3.3.0-1) lucid; · ee55b241

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@308 b8ef2a07-7df7-436f-90b9-41648038564b

ee55b241

Jun 06, 2012

ignore cmake generated files · 4ce4f61b

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@307 b8ef2a07-7df7-436f-90b9-41648038564b

4ce4f61b

delete uneeded files (generated by cmake) · 07539527

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@306 b8ef2a07-7df7-436f-90b9-41648038564b

07539527

Modified version name et jnlp loading · 9a73a1d7

valot authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@305 b8ef2a07-7df7-436f-90b9-41648038564b

9a73a1d7

Jun 05, 2012

shortcut for equal functions · 097aa5fe

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@304 b8ef2a07-7df7-436f-90b9-41648038564b

097aa5fe

Jun 04, 2012

fixed bug detected by Benoit Valot and Mélisande Blein : X axis label were not... · 0006c972

langella authored 12 years ago

fixed bug detected by Benoit Valot and Mélisande Blein : X axis label were not visible using inkscape

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@303 b8ef2a07-7df7-436f-90b9-41648038564b

0006c972

May 30, 2012

removed commented code using hascode · ccd5a832

valot authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@302 b8ef2a07-7df7-436f-90b9-41648038564b

ccd5a832

Add equals function to group and subgroup · 306af45c

valot authored 12 years ago

Don't clear and addAll at each subgroup addition of groupList
Performed removed non informative sub-group after finish grouping.
Now, all work fine and are reproductibly.

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@301 b8ef2a07-7df7-436f-90b9-41648038564b

306af45c

Remove abusive debug message · 917e6a16

valot authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@300 b8ef2a07-7df7-436f-90b9-41648038564b

917e6a16

May 29, 2012

New version, just finish to test before distributed · 1a3060ec

valot authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@299 b8ef2a07-7df7-436f-90b9-41648038564b

1a3060ec

Conserved String for hashmap on factory, but use it to ensure unicity of... · c700a62b

valot authored 12 years ago

Conserved String for hashmap on factory, but use it to ensure unicity of object. Then equals test was performed on the pointer directly. This must increased speedly.

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@298 b8ef2a07-7df7-436f-90b9-41648038564b

c700a62b

May 25, 2012

why not ? · 659406f7

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@297 b8ef2a07-7df7-436f-90b9-41648038564b

659406f7

Used String for hashsamplescan... factory instead of reference to object. · 4182e1a9

valot authored 12 years ago

Debugging maschroml streaming writer.

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@296 b8ef2a07-7df7-436f-90b9-41648038564b

4182e1a9

May 24, 2012

performance problem fixed using hashmap · f2fedb42

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@295 b8ef2a07-7df7-436f-90b9-41648038564b

f2fedb42

big bug on grouping factories fixed · 10bf5fc0

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@294 b8ef2a07-7df7-436f-90b9-41648038564b

10bf5fc0

code more straight on return condition · 8ae53d31

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@293 b8ef2a07-7df7-436f-90b9-41648038564b

8ae53d31

adding override annotation keyword to better control heritage · 9df8a169
langella authored 12 years ago
```
git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@292 b8ef2a07-7df7-436f-90b9-41648038564b
```
9df8a169

adding final keyword to better control heritage · a0d1808e

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@291 b8ef2a07-7df7-436f-90b9-41648038564b

a0d1808e

adding final keyword to better control heritage · cca5f0cf

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@290 b8ef2a07-7df7-436f-90b9-41648038564b

cca5f0cf

replacing equals with pure abstracted method · 2cb6eb60

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@289 b8ef2a07-7df7-436f-90b9-41648038564b

2cb6eb60

log collision event · 3ce01ea8

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@288 b8ef2a07-7df7-436f-90b9-41648038564b

3ce01ea8

log the peptide that caused the fusion · b138dda6

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@287 b8ef2a07-7df7-436f-90b9-41648038564b

b138dda6

using msRun equals function instead of sample name compare · 102225f4

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@286 b8ef2a07-7df7-436f-90b9-41648038564b

102225f4

new msRun equality check · 10c85dd4

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@285 b8ef2a07-7df7-436f-90b9-41648038564b

10c85dd4

May 23, 2012

new debug messages · 4bdd37da

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@284 b8ef2a07-7df7-436f-90b9-41648038564b

4bdd37da

reading local log4j.properties file · 68b39d42

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@283 b8ef2a07-7df7-436f-90b9-41648038564b

68b39d42

deleting sh file : automatically build with cmake · 6da38e0a

langella authored 12 years ago

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@282 b8ef2a07-7df7-436f-90b9-41648038564b

6da38e0a

taking into account the new jar lib cxf-common-utilities-2.2.4.jar in ubuntu building process · 6f2fa525
langella authored 12 years ago
```
git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@281 b8ef2a07-7df7-436f-90b9-41648038564b
```
6f2fa525

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