Corrected link to xtandem executable and java download

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@312 b8ef2a07-7df7-436f-90b9-41648038564b

xtandempipeline/doc/xtandem_pipeline.tex

@@ -69,10 +69,10 @@ This program is distributed in the hope that it will be useful, but WITHOUT ANY
 
 \subsection{Requirements}
 $\X$ works on all platforms (Linux, Windows and Mac). Java 1.6 must be installed (it can be found :
-\href{https://cds.sun.com/is-bin/INTERSHOP.enfinity/WFS/CDS-CDS_Developer-Site/en_US/-/USD/ViewProductDetail-Start?ProductRef=jre-6u14-oth-JPR@CDS-CDS_Developer}{here}).
+\href{http://java.com/fr/download/index.jsp}{here}).
 
 \subsection{Third party softwares for Windows and Mac}
-Download the X!Tandem executable from the \href{ftp://ftp.thegpm.org/projects/tandem/binaries/}{GPM site}.
+Download the X!Tandem executable from the \href{ftp://ftp.thegpm.org/projects/tandem/binary/}{GPM site}.
 
 \subsection{Third party softwares for Linux}
 \subsubsection*{Ubuntu}

xtandempipeline/src/fr/inra/pappso/xtandempipeline/ui/swt/Path_configuration.java

@@ -215,7 +215,7 @@ public class Path_configuration {
 	}
 
 	public void download_xtandem_software() {
-		String u = "ftp://ftp.thegpm.org/projects/tandem/binaries/";
+		String u = "ftp://ftp.thegpm.org/projects/tandem/binary/";
 		if (Desktop.isDesktopSupported()) {
 			// On récupère l'instance du desktop :
 			Desktop desktop = Desktop.getDesktop();