delete uneeded file

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@316 b8ef2a07-7df7-436f-90b9-41648038564b

xtandempipeline/build_ubuntu.xml

-<project name="XtandemPipeline" default="jarWithClasspath" basedir=".">
-	<description>
-		MyXtandemParser ant build file
-	</description>
-
-	<!-- set global properties for this build -->
-	<!---Dusr=/usr/local-->
-
-	<property name="usr.dir" location="/usr/local" />
-	<property name="lib" location="/usr/share/java" />
-	<property name="share" location="share" />
-	<property name="resources" location="src/resources" />
-	<property name="src" location="src" />
-	<property name="build" location="build" />
-	<property name="dist" location="dist" />
-	<property name="confDir" location="src/conf/release" />
-	<property name="docDir" location="doc" />
-
-	<target name="reset">
-		<!-- reset the build and dist directory -->
-		<delete dir="build" />
-		<delete dir="dist" />
-		<mkdir dir="build" />
-		<mkdir dir="dist" />
-		<mkdir dir="conf" />
-
-		<!--
-		<copy file="lib/libproteomicsvg.jar" tofile="${share}/xtandempipeline/libproteomicsvg.jar" overwrite="true" />
-		<copy file="lib/libodsstream.jar" tofile="${share}/xtandempipeline/libodsstream.jar" overwrite="true" />
-		-->
-	</target>
-
-
-	<target name="init" depends="reset">
-		<!-- Create the time stamp -->
-		<tstamp />
-	</target>
-
-	<path id="classpath">
-		<!--xml-apis-ext.jar xml-apis.jar xercesImpl.jar xalan2.jar swt.jar batik.jar  liblog4j1.2-java -->
-		<fileset dir="${lib}" includes="commons-httpclient.jar commons-codec.jar commons-logging.jar log4j-1.2.jar xml-apis-ext.jar xml-apis.jar xercesImpl.jar xalan2.jar swt.jar batik.jar" />
-		<fileset dir="${share}/xtandempipeline" includes="libproteomicsvg.jar" />
-		<fileset dir="${share}/xtandempipeline" includes="libodsstream.jar" />
-		<fileset dir="${share}/xtandempipeline" includes="PPClient.jar" />
-		<fileset dir="${share}/xtandempipeline" includes="mascotdatfile-3.2.10.jar" />
-		<fileset dir="${share}/xtandempipeline" includes="cxf-common-utilities-2.2.4.jar" />
-	</path>
-
-
-	<target name="compile" depends="init" description="compile the source and put in build directory">
-		<!-- Compile the java code from ${src} into ${build} -->
-		<javac srcdir="${src}" destdir="${build}" target="1.6" source="1.6" classpathref="classpath" includeantruntime="false">
-			<compilerarg line="-encoding utf-8" />
-			<classpath>
-				<pathelement location="${build}/fr/inra/pappso/xtandempipeline/XtandemPipelineMain.class" />
-			</classpath>
-		</javac>
-	</target>
-
-
-	<target name="jarWithClasspath" depends="compile" description="generates the jar file for Ubuntu">
-
-
-		<mkdir dir="${build}/conf" />
-		<copy todir="${build}/conf" overwrite="true">
-			<fileset dir="${confDir}" includes="*" />
-		</copy>
-		<copy todir="${build}/fr" overwrite="true">
-			<fileset dir="${src}/fr" includes="**" />
-		</copy>
-		<mkdir dir="${build}/resources" />
-		<copy todir="${build}/resources" overwrite="true">
-			<fileset dir="${resources}" includes="**" />
-		</copy>
-		<!--<copy file="${resources}/mascotdatfile-3.2.9/modificationConversion.txt" toDir="${build}" overwrite="true" />-->
-
-		<jar jarfile="./share/xtandempipeline/XtandemPipeline.jar" basedir="${build}">
-			<!--<fileset dir="${confDir}" />-->
-			<!--<fileset file=".classpath" />-->
-			<manifest>
-				<attribute name="Main-Class" value="fr.inra.pappso.xtandempipeline.XtandemPipelineMain" />
-				<attribute name="Class-Path" value="/usr/share/java/commons-httpclient.jar /usr/share/java/commons-codec.jar /usr/share/java/commons-logging.jar /usr/share/java/log4j-1.2.jar /usr/share/java/xml-apis-ext.jar /usr/share/java/xml-apis.jar /usr/share/java/xercesImpl.jar /usr/share/java/xalan2.jar /usr/share/java/swt.jar /usr/share/java/batik.jar ${usr.dir}/share/xtandempipeline/libproteomicsvg.jar ${usr.dir}/share/xtandempipeline/libodsstream.jar ${usr.dir}/share/xtandempipeline/PPClient.jar ${usr.dir}/share/xtandempipeline/mascotdatfile-3.2.10.jar ${usr.dir}/share/xtandempipeline/cxf-common-utilities-2.2.4.jar" />
-			</manifest>
-		</jar>
-
-		<!-- cd bin; jar -cf client.jar; -->
-		<!-- <jar jarfile="client.jar" basedir="bin"/> -->
-	</target>
-
-	<target name="clean" depends="jarWithClasspath">
-		<delete dir="jnlp" />
-		<delete dir="build" />
-		<delete dir="dist" />
-	</target>
-
-	<target name="copyInShare" description="copies jar needed by the ubuntu package into the share directory">
-		<copy file="./lib/libproteomicsvg.jar" todir="${share}/xtandempipeline" overwrite="true" />
-		<copy file="./lib/libodsstream.jar" todir="${share}/xtandempipeline" overwrite="true" />
-		<copy file="./lib/PPClient.jar" todir="${share}/xtandempipeline" overwrite="true" />
-		<copy file="./lib/mascotdatfile-3.2.10.jar" todir="${share}/xtandempipeline" overwrite="true" />
-		<copy file="./lib/cxf-common-utilities-2.2.4.jar" todir="${share}/xtandempipeline" overwrite="true" />
-	</target>
-</project>
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