Commits · 6b7a60c1faef0d3d00ff5d99f09feb7e0cf0a4d8 · PAPPSO / i2MassChroQ · GitLab

Snippets Groups Projects

Suite à l'opération de maintenance sur le DC de Toulouse, nous n'avons pas encore récupéré tous les runners partagés (2/8)... d'où l'attente observée pour certains jobs.
Nous vous informerons quand la situation sera revenue à la normale. Nos excuses pour la gêne occasionnée.

Bonne nouvelle !!!
Les runners partagées (grande capacité) qui ne marchaient plus depuis l'arrêt du DataCenter sont de nouveaux opérationnels !!
Il reste deux runners partagés que nous n'avons pas encore pu redemarrer pour retrouver la pleine capacité.

Sep 05, 2019
- q-value can be computed on Mascot results · 6b7a60c1
  Langella Olivier authored 5 years ago
  
  6b7a60c1
- better code to check peptide validity, new tooltips very helpfull in dialog box · c11368ee
  Langella Olivier authored 5 years ago
  
  c11368ee
- use size_t instead of unsigned int to count · cf0f0a31
  Langella Olivier authored 5 years ago
  
  cf0f0a31
- first running version with filter on q-value · 25f409fc
  Langella Olivier authored 5 years ago
  
  25f409fc
- first running version with filter on q-value · 4fd1bcd4
  Langella Olivier authored 5 years ago
  
  4fd1bcd4
Sep 04, 2019
- WIP: new utils function to compute FDR in one place... and may be change it easily · e0f889c0
  Langella Olivier authored 5 years ago
  
  e0f889c0
- computing q-values for tandem identifications · 5eb5b095
  Langella Olivier authored 5 years ago
  
  5eb5b095
- WIP: computing q-values · 5f56a0d8
  Langella Olivier authored 5 years ago
  
  5f56a0d8
Sep 03, 2019
- FDR computation not obvious, keeping legacy method · 1c673941
  Langella Olivier authored 5 years ago
  
  1c673941
Aug 22, 2019
- better error messages, MS run file check is made by workerthread · fdc69f0e
  Langella Olivier authored 5 years ago
  
  fdc69f0e
Aug 05, 2019
- use of contaminant removal mode in projects, read and write new contaminant... · 29e445f6
  Langella Olivier authored 5 years ago
  
  use of contaminant removal mode in projects, read and write new contaminant removal mode from XPIP files
  29e445f6
Jul 29, 2019
- new feature to take into account different ways of removing contaminants · 321afbbe
  Langella Olivier authored 5 years ago
  
  321afbbe
Jul 16, 2019
- preparing 0.2.39 · 648354fb
  Langella Olivier authored 5 years ago
  
  648354fb
- generate mcqml without peptide labels: needs test · b4b7b1af
  Langella Olivier authored 5 years ago
  
  b4b7b1af
Jul 05, 2019
- find spectrum directly by index if scan number is not supported · 5ab5980f
  Langella Olivier authored 5 years ago
  
  5ab5980f
Jun 18, 2019
- xtpcpp (0.2.38-4) stretch · c3a3762d
  Langella Olivier authored 5 years ago
  
  xtpcpp_0.2.38-4
  
  c3a3762d
- xtpcpp (0.2.38-3) stretch · 0b1219d8
  Langella Olivier authored 5 years ago
  
  xtpcpp_0.2.38-3
  
  0b1219d8
- xtpcpp (0.2.38-2) stretch · 2609d986
  Langella Olivier authored 5 years ago
  
  xtpcpp_0.2.38-2
  
  2609d986
Jun 14, 2019
- progress bar to look for best msrun retention time · e99f8ce8
  Langella Olivier authored 5 years ago
  
  e99f8ce8
Jun 13, 2019
- accepts tandem TPP version · 51648010
  Langella Olivier authored 5 years ago
  
  51648010
- GUI updated to choose msrun for alignment either automatic or manual · a539f35a
  Langella Olivier authored 5 years ago
  
  a539f35a
- first msrun reference finder · 6d2a9bb6
  Langella Olivier authored 5 years ago
  
  6d2a9bb6
- tpp tandem version compliant · d3d09069
  Langella Olivier authored 5 years ago
  
  d3d09069
Jun 12, 2019
- stronger tandem parameter file parser · 08a7e39e
  Langella Olivier authored 5 years ago
  
  08a7e39e
- stronger tandem parameter file parser · 8a796ad0
  Langella Olivier authored 5 years ago
  
  8a796ad0
- wip: accept weak tandem parameter files · 8271f8f9
  Langella Olivier authored 5 years ago
  
  8271f8f9
Jun 10, 2019
- preparing msrun retention time · 69890826
  Langella Olivier authored 5 years ago
  
  69890826
- build retention times for msruns only with valid peptide evidences · e2059af6
  Langella Olivier authored 5 years ago
  
  e2059af6
- WIP: finding best msrun for alignment reference · 83e75fdc
  Langella Olivier authored 5 years ago
  
  83e75fdc
Jun 09, 2019
- WIP: using msrunretention object · 9225e6b9
  Langella Olivier authored 5 years ago
  
  9225e6b9
- WIP: using msrunretention object · cd0259e3
  Langella Olivier authored 5 years ago
  
  cd0259e3
Jun 06, 2019
- flush output stream before closing it · 7fb24ede
  Langella Olivier authored 5 years ago
  
  7fb24ede
- new pappso ms ++ API updates · 87678884
  Langella Olivier authored 5 years ago
  
  87678884
- WIP: using new pappsoms++ library · 98f77814
  Langella Olivier authored 5 years ago
  
  98f77814
May 17, 2019
- use real msrun xml id · cf0257e1
  Langella Olivier authored 5 years ago
  
  cf0257e1
May 09, 2019
- first test OK with new pappso ms ++ library · bd4f789b
  Langella Olivier authored 5 years ago
  
  bd4f789b
May 08, 2019
- WIP: scan number modifications · 65081f70
  Langella Olivier authored 5 years ago
  
  65081f70
- WIP: replacing scan number by index · 8be1c1d8
  Langella Olivier authored 5 years ago
  
  8be1c1d8
May 07, 2019
- new PAPPSO C++ library · 1007066a
  Langella Olivier authored 5 years ago
  
  1007066a
May 01, 2019
- WIP: new xic extractor API · 357e9b7c
  Langella Olivier authored 5 years ago
  
  357e9b7c