Commits · 6b7a60c1faef0d3d00ff5d99f09feb7e0cf0a4d8 · PAPPSO / i2MassChroQ · GitLab

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Suite à l'opération de maintenance sur le DC de Toulouse, nous n'avons pas encore récupéré tous les runners partagés (2/8)... d'où l'attente observée pour certains jobs.
Nous vous informerons quand la situation sera revenue à la normale. Nos excuses pour la gêne occasionnée.

Bonne nouvelle !!!
Les runners partagées (grande capacité) qui ne marchaient plus depuis l'arrêt du DataCenter sont de nouveaux opérationnels !!
Il reste deux runners partagés que nous n'avons pas encore pu redemarrer pour retrouver la pleine capacité.

Sep 05, 2019
- q-value can be computed on Mascot results · 6b7a60c1
  Langella Olivier authored 5 years ago
  
  6b7a60c1
- better english · b6b7dd24
  Langella Olivier authored 5 years ago
  
  b6b7dd24
- better code to check peptide validity, new tooltips very helpfull in dialog box · c11368ee
  Langella Olivier authored 5 years ago
  
  c11368ee
- use size_t instead of unsigned int to count · cf0f0a31
  Langella Olivier authored 5 years ago
  
  cf0f0a31
- first running version with filter on q-value · 25f409fc
  Langella Olivier authored 5 years ago
  
  25f409fc
- first running version with filter on q-value · 4fd1bcd4
  Langella Olivier authored 5 years ago
  
  4fd1bcd4
- make use of central util function to compute FDR the same way everywhere · 69a31064
  Langella Olivier authored 5 years ago
  
  69a31064
Sep 04, 2019
- WIP: new utils function to compute FDR in one place... and may be change it easily · e0f889c0
  Langella Olivier authored 5 years ago
  
  e0f889c0
- computing q-values for tandem identifications · 5eb5b095
  Langella Olivier authored 5 years ago
  
  5eb5b095
- WIP: computing q-values · 5f56a0d8
  Langella Olivier authored 5 years ago
  
  5f56a0d8
Sep 03, 2019
- FDR computation not obvious, keeping legacy method · 29d7c0d4
  Langella Olivier authored 5 years ago
  
  29d7c0d4
- FDR computation not obvious, keeping legacy method · 1c673941
  Langella Olivier authored 5 years ago
  
  1c673941
- fixing underestimation of FDR : this should be doubled, prior to Joshua et al 2007 · 812fa959
  Langella Olivier authored 5 years ago
  
  812fa959
Aug 22, 2019
- better error messages, MS run file check is made by workerthread · fdc69f0e
  Langella Olivier authored 5 years ago
  
  fdc69f0e
Aug 06, 2019
- reads and writes contaminant removal mode in xpip files · 44133390
  Langella Olivier authored 5 years ago
  
  44133390
- user interface to select contaminant removal mode · dc3dbb36
  Langella Olivier authored 5 years ago
  
  dc3dbb36
Aug 05, 2019
- use of contaminant removal mode in projects, read and write new contaminant... · 29e445f6
  Langella Olivier authored 5 years ago
  
  use of contaminant removal mode in projects, read and write new contaminant removal mode from XPIP files
  29e445f6
Jul 29, 2019
- new feature to take into account different ways of removing contaminants · 321afbbe
  Langella Olivier authored 5 years ago
  
  321afbbe
- forgotten evalue return · b87ced60
  Langella Olivier authored 5 years ago
  
  b87ced60
- pragma once in header · e146aa3b
  Langella Olivier authored 5 years ago
  
  e146aa3b
Jul 16, 2019
- preparing 0.2.39 · 648354fb
  Langella Olivier authored 5 years ago
  
  648354fb
- generate mcqml without peptide labels: needs test · b4b7b1af
  Langella Olivier authored 5 years ago
  
  b4b7b1af
Jul 05, 2019
- find spectrum directly by index if scan number is not supported · 5ab5980f
  Langella Olivier authored 5 years ago
  
  5ab5980f
Jun 18, 2019
- xtpcpp (0.2.38-4) stretch · c3a3762d
  Langella Olivier authored 5 years ago
  
  xtpcpp_0.2.38-4
  
  c3a3762d
- xtpcpp (0.2.38-3) stretch · 0b1219d8
  Langella Olivier authored 5 years ago
  
  xtpcpp_0.2.38-3
  
  0b1219d8
- xtpcpp (0.2.38-2) stretch · 2609d986
  Langella Olivier authored 5 years ago
  
  xtpcpp_0.2.38-2
  
  2609d986
Jun 17, 2019
- xtpcpp (0.2.38-1) stretch · e9d0f15d
  Langella Olivier authored 5 years ago
  
  xtpcpp_0.2.38-1
  
  e9d0f15d
Jun 14, 2019
- progress bar to look for best msrun retention time · e99f8ce8
  Langella Olivier authored 5 years ago
  
  e99f8ce8
Jun 13, 2019
- look for the best msrun reference in the main window worker thread · 039c8a8c
  Langella Olivier authored 5 years ago
  
  039c8a8c
- accepts tandem TPP version · 51648010
  Langella Olivier authored 5 years ago
  
  51648010
- GUI updated to choose msrun for alignment either automatic or manual · a539f35a
  Langella Olivier authored 5 years ago
  
  a539f35a
- first msrun reference finder · 6d2a9bb6
  Langella Olivier authored 5 years ago
  
  6d2a9bb6
- tpp tandem version compliant · d3d09069
  Langella Olivier authored 5 years ago
  
  d3d09069
Jun 12, 2019
- stronger tandem parameter file parser · 08a7e39e
  Langella Olivier authored 5 years ago
  
  08a7e39e
- stronger tandem parameter file parser · 8a796ad0
  Langella Olivier authored 5 years ago
  
  8a796ad0
- wip: accept weak tandem parameter files · 8271f8f9
  Langella Olivier authored 5 years ago
  
  8271f8f9
Jun 10, 2019
- preparing msrun retention time · 69890826
  Langella Olivier authored 5 years ago
  
  69890826
- build retention times for msruns only with valid peptide evidences · e2059af6
  Langella Olivier authored 5 years ago
  
  e2059af6
- WIP: finding best msrun for alignment reference · 83e75fdc
  Langella Olivier authored 5 years ago
  
  83e75fdc
Jun 09, 2019
- WIP: using msrunretention object · 9225e6b9
  Langella Olivier authored 5 years ago
  
  9225e6b9