Commits · 1c673941bb6fa525d471500b22f9221f3ef37055 · PAPPSO / i2MassChroQ · GitLab

Snippets Groups Projects

Sep 03, 2019
- FDR computation not obvious, keeping legacy method · 1c673941
  Langella Olivier authored 5 years ago
  
  1c673941
Aug 05, 2019
- use of contaminant removal mode in projects, read and write new contaminant... · 29e445f6
  Langella Olivier authored 5 years ago
  
  use of contaminant removal mode in projects, read and write new contaminant removal mode from XPIP files
  29e445f6
Feb 05, 2019
- indentation · de916736
  Langella Olivier authored 6 years ago
  
  de916736
Feb 02, 2019
- WIP: adapt code to the new pappsoMS++ code policy · 1d45b982
  Langella Olivier authored 6 years ago
  
  1d45b982
Nov 09, 2018
- display separately fdr on psm and on peptides · 3862ecde
  Langella Olivier authored 6 years ago
  
  3862ecde
Oct 30, 2018
- write FDR in ODS file as percentage, compute peptide FDR on all proteins · 444110bc
  Langella Olivier authored 6 years ago
  
  444110bc
Oct 29, 2018
- count peptide directly without protein validity · 2b860768
  Langella Olivier authored 6 years ago
  
  2b860768
Oct 18, 2018
- NSAF indice handles labeling methods · ee09dcc4
  Langella Olivier authored 6 years ago
  
  ee09dcc4
Sep 03, 2018
- indentation with clang format v6.0 · 49c90b0a
  Langella Olivier authored 6 years ago
  
  49c90b0a
- indentation and really make sure that we look for MSrun in the right place · b62b91cf
  Langella Olivier authored 6 years ago
  
  b62b91cf
May 03, 2018
- first NSAF version · dd5989d8
  Langella Olivier authored 6 years ago
  
  dd5989d8
Mar 05, 2018
- WIP: Mascot parser · 00e57c9c
  Langella Olivier authored 7 years ago
  
  00e57c9c
Jan 27, 2018
- look for peptide evidence in Msrun · 11b044ef
  Langella Olivier authored 7 years ago
  
  11b044ef
Jan 12, 2018
- draw xic with all MSMS events · 1b4de182
  Langella Olivier authored 7 years ago
  
  1b4de182
Jan 09, 2018
- better individual project mode · 3bea2267
  Langella Olivier authored 7 years ago
  
  3bea2267
- replacing identifications tabs with combo box · ff2bd115
  Langella Olivier authored 7 years ago
  
  ff2bd115
Dec 17, 2017
- refactoring · 9b3b8529
  Langella Olivier authored 7 years ago
  
  9b3b8529
- compute FDR on peptide evidence instead of peptide match · feb7697e
  Langella Olivier authored 7 years ago
  
  feb7697e
Dec 16, 2017
- change in mass delta compute : a peptide evidence is only counted once · a9ecf09d
  Langella Olivier authored 7 years ago
  
  a9ecf09d
- peptide/mass are counted per valid proteins · f9649280
  Langella Olivier authored 7 years ago
  
  f9649280
Nov 18, 2017
- WIP: new peptide evidence object, huge work to do · 7773df8a
  Langella Olivier authored 7 years ago
  
  7773df8a
Nov 16, 2017
- xpip export system is going on · 9393c31c
  Langella Olivier authored 7 years ago
  
  9393c31c
Oct 21, 2017
- monitoring grouping · a04b739c
  Langella Olivier authored 7 years ago
  
  a04b739c
Sep 09, 2017
- new number of distinct peptides within whole grouping experiment · 17a9c4fc
  Langella Olivier authored 7 years ago
  
  17a9c4fc
Jun 19, 2017
- debug message · c80eea59
  Olivier Langella authored 7 years ago
  
  c80eea59
Jun 10, 2017
- problem updating ptm islands · 36a4cee4
  Olivier Langella authored 7 years ago
  
  36a4cee4
- update ptm table model · ff92760c
  Olivier Langella authored 7 years ago
  
  ff92760c
May 30, 2017
- first PTM island table ! · 6354d8b1
  Olivier Langella authored 7 years ago
  
  6354d8b1
- get ptm grouping id · b9a03178
  Olivier Langella authored 7 years ago
  
  b9a03178
May 17, 2017
- WIP: proticdbml output · a71b1211
  Olivier Langella authored 7 years ago
  
  a71b1211
- WIP : proticdbml writer, test xpip · cc4bc995
  Olivier Langella authored 7 years ago
  
  cc4bc995
May 12, 2017
- replace auto by true pointers · 5d349337
  Olivier Langella authored 7 years ago
  
  5d349337
May 09, 2017
- new ODS grouping sheet · 5b4ebea8
  Olivier Langella authored 7 years ago
  
  5b4ebea8
Apr 23, 2017
- new peptide counting method : peptide+mass+sample · cd76de95
  Olivier Langella authored 7 years ago
  
  cd76de95
Apr 22, 2017
- do not compute mass deviation using decoy proteins · fd3f1694
  Olivier Langella authored 7 years ago
  
  fd3f1694
Apr 19, 2017
- dont filter on protein when counting peptides · 85e3d1cf
  Olivier Langella authored 7 years ago
  
  85e3d1cf
Apr 09, 2017
- new group functions · 35f50c95
  Olivier Langella authored 7 years ago
  
  35f50c95
Apr 07, 2017
- compute mass precision · 81b7860f
  Olivier Langella authored 7 years ago
  
  81b7860f
- count factorisation · 7e5372d2
  Olivier Langella authored 7 years ago
  
  7e5372d2
- FDR computation OK · b7c9c59e
  Olivier Langella authored 7 years ago
  
  b7c9c59e