get_samples replaced by getMsRunSet

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@363 b8ef2a07-7df7-436f-90b9-41648038564b

xtandempipeline/src/fr/inra/pappso/xtandempipeline/sax_parse/ProticDbMlWriter.java

@@ -183,7 +183,7 @@ public class ProticDbMlWriter {
 			writer.writeStartElement("samples");
 
 			for (Identification ident : arrayIdentifications) {
-				for (MsRun samp : ident.get_samples()) {
+				for (MsRun samp : ident.getMsRunSet()) {
 					writer.writeStartElement("sample");
 					String id_samp = "samp" + sample_to_id.size();
 					String id_msrun = "msr" + msrun_to_id.size();
@@ -216,7 +216,7 @@ public class ProticDbMlWriter {
 			writer.writeStartElement("msRuns");
 
 			for (Identification ident : arrayIdentifications) {
-				for (MsRun samp : ident.get_samples()) {
+				for (MsRun samp : ident.getMsRunSet()) {
 
 					String name = samp.getSampleName();
 					name = name.replaceAll(".xml", "");