Commits · 300c79d23835d2c24135e056606067084f383479 · genotoul-bioinfo / ngspipelines

Jun 09, 2016
- Useless work of pavel · 300c79d2
  Celine Noirot authored 8 years ago
  
  300c79d2
- Changement orientation lib name + echelle log · dc181a07
  Celine Noirot authored 8 years ago
  
  dc181a07
- Reorganize section options. · 1fd70c4f
  Celine Noirot authored 8 years ago
  
  Add comment in load config file
  1fd70c4f
Jun 08, 2016
- Config file commented to help usage. · 7a046f83
  Celine Noirot authored 8 years ago
  
  7a046f83
- Config file commented to help usage. · 1bf503d3
  Celine Noirot authored 8 years ago
  
  1bf503d3
- Correct 2 things : · 574bf11e
  Celine Noirot authored 8 years ago
  
  - do not zip merge_count.cvs - no more need to have same lib name and fastq file name.
  574bf11e
- Debug favorite · 691c5ecd
  Celine Noirot authored 8 years ago
  
  691c5ecd
- Debug add to favorite · 6bf46400
  Celine Noirot authored 8 years ago
  
  6bf46400
Jun 07, 2016
- Optimization of rarefaction curves · 7c285ea8
  Celine Noirot authored 8 years ago
  
  Debug normalization when only 2 libs are provided
  7c285ea8
Jun 06, 2016
- Philippe updates, add tooltip and organize result page · fca8a86d
  Celine Noirot authored 8 years ago
  
  fca8a86d
- Debug best_annot in load and debug normalization with only one library · 77b5da20
  Celine Noirot authored 8 years ago
  
  77b5da20
- Create data link in plugin · 5fcd38a9
  Celine Noirot authored 8 years ago
  
  5fcd38a9
May 31, 2016
- Debug variant.file parameters · 02700366
  Celine Noirot authored 8 years ago
  
  02700366
May 30, 2016
- Debug load without vcf. · 2a8699de
  Celine Noirot authored 8 years ago
  
  2a8699de
May 13, 2016
- if hit name is none, use the hit id for the name in the gff file · 917ee791
  Claire Hoede authored 8 years ago
  
  917ee791
May 11, 2016
- Add Rscript 3.2 · 783707cd
  Celine Noirot authored 8 years ago
  
  783707cd
- recompile jar with java 1.6 as on ngspipelines server · fc572014
  Celine Noirot authored 8 years ago
  
  fc572014
Apr 29, 2016
- Compile with java 1.6 · b2f6af6c
  Celine Noirot authored 8 years ago
  
  b2f6af6c
Apr 25, 2016
- bug best annotations count · 48a7d3a8
  orue orue authored 8 years ago
  
  48a7d3a8
Apr 22, 2016
- bad parsing of rfam informations · ac4f6174
  orue orue authored 8 years ago
  
  ac4f6174
Apr 15, 2016
- integration of EdgeR, reste la visu a ameliorer. · 84843755
  Celine Noirot authored 9 years ago
  
  84843755
Apr 11, 2016
- Correct option for merging SNP · 0f8de69b
  Celine Noirot authored 9 years ago
  
  0f8de69b
- Debug splitting · 63253ae1
  Celine Noirot authored 9 years ago
  
  63253ae1
Apr 01, 2016
- Correct bug copy/paste user_go_file · 59863a90
  Celine Noirot authored 9 years ago
  
  59863a90
Mar 31, 2016
- Add miseq has library allowed. · e7200bee
  Celine Noirot authored 9 years ago
  
  e7200bee
Mar 30, 2016
- Add java memory · afaf5f23
  Celine Noirot authored 9 years ago
  
  afaf5f23
- test exist file on masked · 66adb58b
  Celine Noirot authored 9 years ago
  
  66adb58b
- correct no result with repeat masker · eb8514ab
  Celine Noirot authored 9 years ago
  
  eb8514ab
Feb 24, 2016
- No commit message · a7e92627
  orue orue authored 9 years ago
  
  No commit message
  a7e92627
- choice between gene_id and Parent for gene_id information · 391aaebb
  orue orue authored 9 years ago
  
  391aaebb
Feb 23, 2016
- bug if Parent field already in annotation file (GFF3). Own parent field changed by PParent · a0135dc0
  orue orue authored 9 years ago
  
  a0135dc0
Feb 17, 2016
- rRNA components for naming · 5751e518
  orue orue authored 9 years ago
  
  5751e518
- Remove processor not compliant with java6 · 96fcc4d4
  Celine Noirot authored 9 years ago
  
  96fcc4d4
Feb 15, 2016
- remove symb link · 6e707187
  Celine Noirot authored 9 years ago
  
  6e707187
Feb 10, 2016
- improve for still in development · 5ff566d5
  Celine Noirot authored 9 years ago
  
  5ff566d5
Feb 05, 2016
- Unstable version with EdgeR and GOenrichment · d415079c
  Celine Noirot authored 9 years ago
  
  d415079c
Feb 02, 2016
- add display name to predictions · d18bd368
  orue orue authored 9 years ago
  
  d18bd368
- add annotation name in display name · 06987e6b
  orue orue authored 9 years ago
  
  06987e6b
Dec 22, 2015

Add visualisation of DE analysis !!! · 06d657b7

Celine Noirot authored 9 years ago

Link mail fonctionnel.
Add instance handle R script copy and path in ngspipelines.properties of plugins.

06d657b7

Dec 17, 2015
- GO enrichment processor run · 9576fe18
  Gaelle Lefort authored 9 years ago
  
  9576fe18

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