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Repository containing input and output datasets to perform tests on metaGWGS
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SHiNeMaS is a database with its web interface, dedicated to the management of the history of seed lots and related data like phenotyping, environment and cultural practices. SHiNeMaS is freely available under GNU Affero GPL Licence
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The SeSAM R package allows fully automatic construction of two successive genetic maps: a first one including an optimized subset of markers ensuring the robustness of orders to a given statistical threshold, and a second one including almost all polymorphic markers. It can handle all common types of biparental mapping populations, including progenies obtained from crossing heterozygous parents. In addition to the automatic procedure, SeSAM includes many functions for interactive mapping, file formats conversions, and generates many graphs useful to assess the quality of data and maps.
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R-package proposing a framework to apply FAIR principles based on reports created using the bookdown R-package and published as a website (e.g. gitlab pages) and data located on a owncloud/nextcloud server
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R package for recovering and preparing useful data for damage appraisal in a French context
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