Explore projects
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LOZAC H LOIC / AgriSoilMoisture
Apache License 2.0Computes soil moisture over agricultural areas
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L'application rflomics est un package R couplé à une interface shiny permettant la gestion, l'analyse et l'intégration statistique de plusieurs jeux et types de données -omics: RNAseq, proteomics et metabolomics (pour le moment).
Lien vers l'application : https://rflomics.sk8.inrae.fr
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BIOGER / ingenannot
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metexplore / Metexplore Training
Apache License 2.0Updated -
UMR-ASTRE / mapMCDA
GNU General Public License v3.0 onlyProduce an epidemiological risk map by weighting multiple risk factors. https://umr-astre.pages.mia.inra.fr/mapMCDA/
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tropo-group / tropolink-api
GNU General Public License v3.0 or laterTropolink backend (API)
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in-sylva development / in-sylva.gatekeeper
GNU General Public License v3.0 or laterProject used to manage security for In-Sylva Information System
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VANRENTERGHEM Théodore / ShinySbm
MIT LicenseshinySbm is a package containing a shiny application. This application is build for network analysis based on the sbm package made by Chiquet J, Donnet S and Barbillon P (2023) CRAN. It allow to apply and explore the outputs of a Stochastic Block Model. It is useful if you want to analyse your data (could be adjacency matrix or edges list) without R language knowledge or to learn the basic lines of the sbm package.
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Link to running app: https://matrixapp.sk8.inrae.fr
MATRiX is a shiny application dedicated to Mining and Analysis of Transcriptomics data using common biostatistic result files (statistical test result table, normalised data table and samples-groups information). This application helps biologists to perform data exploration with PCA, Venn diagrams, StripCharts, volcanoplots, and Heatmap clustering of genes lists (selecting statistical thresholds) and functional enrichment analyses using a connection to enrichr. https://matrixapp.sk8.inrae.fr
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URGI-Anagen / Caulifinder_docker
MIT LicenseIn frame of EVENT project, all code to build a docker image for the Caulifinder tool. It allows discovering Caulimoviridae sequences in plant genomes.
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UMR GDEC / magatt
GNU General Public License v3.0 or laterPipeline used to tranfert gene annotation (GFF3) between different versions of assemblies.
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SK8 / sk8-apps / ARA / RIVERLY / cruesR
GNU General Public License v3.0 or laterA shiny application that make time series events selection and modification simpler.
Lien vers l'application : https://crues-r.sk8.inrae.fr
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UMR-ASTRE / arbocartoR-app
GNU General Public License v3.0 or laterUpdated -
Cedric Midoux / boardgametools
MIT LicenseUpdated -
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Online version of the shiny application of the R package SOMbrero to performs Self Organizing Maps (https://sombrero.sk8.inrae.fr)
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