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PAPPSO / massXpert
GNU General Public License v3.0 onlymassXpert (of the http://www.msxpertsuite.org software collection) is a program that allows one to define brand new polymer chemistry definitions, to use them to define polymer sequences and to perform a large array of chemical simulations on them.
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Coupling crops models with populations dynamics models in heterogeneous and dynamics landscapes.
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umr-smart / r_packages / rpsur
GNU General Public License v3.0 onlyUpdated -
pubilc repository for the Ambhas groundwater model developped during the ATCHA project
model documentation: https://record-open-archives.pages.mia.inra.fr/ambhas_cpp/
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Thomas Schiex / PMRF
MIT LicenseA clone of the PMRF code (MIT licence) to be able to add some minor bells and whistles for symmetry handling
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Intern development of the methods for microbial guild inference and clustering
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PAPPSO / MassChroQ
GNU General Public License v3.0 onlyMassChroQ (Mass Chromatogram Quantification) is a powerful and versatile software that performs retention time alignment, XIC extraction, peak detection and quantification on data obtained from liquid chromatography-mass spectrometry techniques.
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GSpace is a simulator for large genomic data, based on a generation-by-generation coalescent that takes into account small population size, recombination, and isolation by distance.
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toolbar is an exact discrete optimization tool for graphical models. For most use cases, it has been obsoleted by toulbar2 (on GitHub).
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Nathalie Rousse / erecord
GNU General Public License v3.0 onlyUpdated -
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Pole MIAME / Acoustic / acoustique
GNU Lesser General Public License v2.1 onlyUpdated -
RABOTIN Michael / Hru Delin
GNU General Public License v3.0 or laterUpdated -
Some R codes and a package (in beta) for changepoint detection in trees (with model selection and dynamic programming). It is based on the Ph.D. work of Solène Thépaut (Chapter 3, see: https://tel.archives-ouvertes.fr/tel-02457109/document)
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