Explore projects

Query a hamster database of time-tracking data to perform searches, data-analysis or modifications.

A simple R package to create specific license waivers to add in Dataverse

A method to compare a clustering to a classification with ordinal classes.

Some R codes and a package (in beta) for changepoint detection in trees (with model selection and dynamic programming). It is based on the Ph.D. work of Solène Thépaut (Chapter 3, see: https://tel.archives-ouvertes.fr/tel-02457109/document)

Another multidimensional analysis packag : Hierarchical clustering and principal component analysis with both general and robusts methods

Estimate the spread-rate of epidemics https://umr-astre.pages.mia.inra.fr/spreadrate/

Multiple is a program for de novo discovery of DNA motifs corresponding to Transcription Factor binding sites based on a probabilistic model of the DNA sequence that incorporates expression data as covariates.

A quick overview of the changes of Covid-19 mortality in the most affected countries of the European Union + the United Kingdom and of Africa. https://umr-astre.pages.mia.inra.fr/covid19-mortality/

Source code for shiny app PEREpigenomics: Profile Explorer of Roadmap Epigenomics data Pre-processing scritps: https://github.com/gdevailly/perepigenomicsAnalysis

Illustration of warning in targets using file_in() and here()

A demo-genetic individual-based model for Atlantic salmon populations