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A clone of the PMRF code (MIT licence) to be able to add some minor bells and whistles for symmetry handling

Species Perscrutandis Enixe Locis Locabuntur.

A standalone version of the function performing dynamic programming in a band

Multiple is a program for de novo discovery of DNA motifs corresponding to Transcription Factor binding sites based on a probabilistic model of the DNA sequence that incorporates expression data as covariates.

PAPPSOms++ is a comprehensive C++ library including usefull functions to handle proteomics data (spectrum, peptides, ions, isotopes).

Model to simulate the spread of Map within and between herds via trade movements between dairy herds. Some control measures can be applied. Model is mechanistic and data-driven, stochastic, discrete-time and individual-based.

BONnes Pratiques sur LA gestioN des Données : https://urep.pages.mia.inra.fr/docs/bonpland

Documentation pour le SI SOERE Prairies Permanentes : https://urep.pages.mia.inra.fr/soere-pp/doc_soere-pp

R'MES is a tool for studying word frequencies in biological sequences.

Spike and slab variable selection in nonlinear models

Pompd: Positive Multistate Protein Design

A gene finding software for eukaryotic and prokaryotic organisms.

Species Perscrutandis Enixe Locis Locabuntur.

The computer-model tool CRASH (Crops Rotation and Allocation Simulator using Heuristics) aims at helping technical advisors in supporting farmers in their choices and anticipating agricultural water needs depending on crop acreage.

Scripts used in: "Integration of genomic selection into winter-type bread wheat breeding schemes: a simulation pipeline including economic constraints" S. Ben-Sadoun, A. Fugeray-Scarbel, J. Auzanneau, G. Charmet, S. Lemarié, S. Bouchet

Cirad institutional LaTeX package

Source code for the modelling and inference approach implemented by the INRAE team