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GeT-nextflow-NGL-Bi / wf-Illumina-nf
CeCILL Free Software License Agreement v2.1Pipeline Nextflow
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A new user-friendly metabarcoding pipeline for the characterization of microbial diversity from 16S, 18S, 23S rRNA genes amplicons DOI: 10.5281/zenodo.3678129
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bios4biol / intronSeeker
GNU General Public License v3.0 or laterUpdated -
UMR GDEC / CLARI-TE_smk
GNU Affero General Public License v3.0Updated -
DUGAT-BONY Eric / Cheese_virome
Creative Commons Attribution Share Alike 4.0 InternationalUpdated -
scripts to remap markers as pairs of bait sequences or context sequences.
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Tutorial example for creation of a snakemake workflow using a singularity container on a hpc
Topics: containerUpdated -
UTOPIA: an automatically UpdaTed, cOmPlete and consistent ITS reference dAtabase
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Bibliome / pesv-tm
Apache License 2.0Updated -
GenEpi / Tools / CpG island detection
MIT LicenseUpdated -
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report from a BAM alignment the number of BX:Z: tags shared between to blocks of given size
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