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Agroclim / Indicators / Bibliothèque Java
GNU General Public License v3.0 or laterBibliothèque Java pour calculer des indicateurs agro- et éco-climatiques à partir de données climatiques journalières ou horaires et des donnés phénologiques. Un des modèles phénologiques peut être utilisé à la place des données phénologiques. (Documentation en ligne)
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Prima Regional Model developped during the UE project PRIMA (2008-2011). This code has been produced by Sylvie Huet and Nicolas Dumoulin.
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URGI-Anagen / panTEannot
CeCILL Free Software License Agreement v2.0panTEannot serially annotates transposable elements from multiple genomes using a common reference library. The annotation is a light version of TEannot from REPET package. These annotations can be used as input for the panREPET tool.
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JACQUIN Laval / refpop
GNU General Public License v3.0 or laterThis repository contains the refpop R scripts, for achieving reproducible data analysis and results, according to the FAIR principles
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Agroclim / SAVA
GNU General Public License v3.0 or laterSuivi des Applications jaVa d'Agroclim (Documentation en ligne).
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URGI-Anagen / panREPET
CeCILL Free Software License Agreement v2.0panREPET is a pipeline detecting shared Transposable Element (TE) insertions among a pangenome. It takes in charge multiple de novo whole-genome assemblies of the same species. It compares TE copies between each pair of genomes then identifies TE copies shared by a group of individuals.
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JACQUIN Laval / khamix
GNU General Public License v3.0 or laterKernelized HAplotype-based MIXed model association mapping (KHAMIX)
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JACQUIN Laval / geno_metabo_nirs_prediction
GNU General Public License v3.0 or laterUpdated -
JACQUIN Laval / beagle_v4-0
GNU General Public License v3.0 or laterThis repository provides a generic shell script, the Beagle 4.0 executable, and additional utilities designed to streamline the imputation process.
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MetaboHUB / web-components / MetaboHUB - PeakForest Chemical - Library
Apache License 2.0Updated -
CHIP-GT / AntiPoachingGame
MIT LicenseImplementation of the Anti-Poaching game, a grid-world game between cooperative rangers and independent poachers.
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