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Christian Pichot / cp_in-sylva.search.app
GNU General Public License v3.0 or laterUpdated -
genotoul-bioinfo / metagWGS
GNU General Public License v3.0 onlymetagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. Since release 2.3, binning step with the possibility of cross-alignment is included. It has been developed in collaboration with several CATI BIOS4biol agents. Funded by Antiselfish Project (Labex Ecofect), ExpoMicoPig project (France Futur elevage) and SeqOccIn project (CPER - Occitanie Toulouse / FEDER), ATB_Biofilm funded by PNREST Anses, France genomique (ANR-10-INBS-09-08) and Resalab Ouest.
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Pherosensor / companion-code-BI-DA
GNU General Public License v3.0 or laterUpdated -
open hardware / SETIER Datalogger
CERN Open Hardware Licence Version 2 - Strongly ReciprocalUpdated -
Helper for using Nextcloud client command line tool nextcloudcmd with log analysis and alert sending through Mattermost in case of sync issues.
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Omnicrobe / Omnicrobe database
Apache License 2.0Updated -
Angular interface of the Cassiopée software
Production version of Cassiopée is available at https://cassiopee.g-eau.fr
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The objective of IsoDesign 2.0 is to provide simple and rapid 13C tracer design. Leveraging the influx_si software and through iterative minimization of in silico calculated fluxes standard deviations (SD), IsoDesign 2.0 will help researchers in selecting the best compromise between flux precision and tracer prices.
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holooligo / Omnicrobe web
Apache License 2.0Updated -
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UMR G-EAU / fairify
GNU Affero General Public License v3.0R-package proposing a framework to apply FAIR principles based on reports created using the bookdown R-package and published as a website (e.g. gitlab pages) and data located on a owncloud/nextcloud server
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holooligo / Omnicrobe database
Apache License 2.0Updated -
PO2-Tools / PO²Manager
MIT LicenseUpdated -
GEAPSI-Bioinfo / pipeline / specifics_Ortho_KB
MIT LicenseNextflow pipeline creating a Neo4j Ortho_KB database.
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Omnicrobe / Omnicrobe web
Apache License 2.0Updated -
FormationCalcul2023 / formation-linux
Creative Commons Attribution Share Alike 4.0 InternationalUpdated