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i2MassChroQ (identification & inference -- mass chromatogram quantification) is the successor of X!TandemPipeline-Java. Following a full rewrite in C++17 and integration of the MassChroQ module, i2MassChroQ features a quantitative proteomics solution
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Projet de la version V2 de l'application des ORE.
Le projet est constitué de 2 sous projet :
La partie serveur qui fournit les web services de l'application
La partie UI qui fournit une interface VueJS permettant d'interroger ces Web Service
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Meteor (Metagenomic Explorator), a software for profiling metagenomic data at gene level
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shinySbm is a package containing a shiny application. This application is build for network analysis based on the sbm package made by Chiquet J, Donnet S and Barbillon P (2023) CRAN. It allow to apply and explore the outputs of a Stochastic Block Model. It is useful if you want to analyse your data (could be adjacency matrix or edges list) without R language knowledge or to learn the basic lines of the sbm package.
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Pipeline used to tranfert gene annotation (GFF3) between different versions of assemblies.
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