Explore projects

Tropolink backend (API)

Base docker image for Rare project

Java library for metabolic networks

Package R with a shiny interface to run an interactive differential gene/region expression analysis.

Pipeline used to tranfert gene annotation (GFF3) between different versions of assemblies.

Produce an epidemiological risk map by weighting multiple risk factors. https://umr-astre.pages.mia.inra.fr/mapMCDA/

Project used to manage security for In-Sylva Information System

MCQR is a comprehensive set of objects and function for R to handle MassChroQ results.

This project is the entrypoint for an Information System dedicated to manage a forest experimentation metadata catalog. It relies on a metadata standard available at URL https://data.inrae.fr/dataset.xhtml?persistentId=doi:10.15454/ELXRGY.

A project to try things, to test...

Dockerized Blazegraph

A quick overview of the changes of Covid-19 mortality in the most affected countries of the European Union + the United Kingdom and of Africa. https://umr-astre.pages.mia.inra.fr/covid19-mortality/

In frame of EVENT project, all code to build a docker image for the Caulifinder tool. It allows discovering Caulimoviridae sequences in plant genomes.

Bisulfite Sequencing Processing Software : Snakemake Pipeline

Atelier développement d’une application interactive Shiny lors du hackathon inter-CATI omics 2020

Stage de formation : « Notions de base en statistiques ». https://umr-astre.pages.mia.inra.fr/training/notions_stats/