Explore projects

A viewer using D-Genies

The software enable to retrieve information (exon boundaries, mutation effect, known SNP...) about transcribed SNP. It's based on ensembl API.

This project is dedicated to targets prediction of bacterial non-coding RNA and their visualisation through a web interface.

Coupling crops models with populations dynamics models in heterogeneous and dynamics landscapes.

jvenn is a plug-in for the jQuery Javascript library. It is a flexible tool, based upon the venny tool first developed by J.C Oliveros (Oliveros, J.C (2007) VENNY, An integrative tool for comparing lists with Venn Diagrams).

To track modifications on a galaxy instance, in our way to design a production frame.

job array allows managing list of jobs execution across sge and PBS scheduler system. each job is considered as an independent task. DAG management is also possible by defining constraints between job array

Estimate the spread-rate of epidemics https://umr-astre.pages.mia.inra.fr/spreadrate/

Work during my internship at IRHS. A new method of visualization for displaying metadata changes in an iterative biclustering algorithm

We introduce jflow, a Workflow Management System (WMS), composed of Jquery plugins which can easily be embedded in any WEB application and a Python library providing all requested features to setup, run and monitor workflows.

DRAP is a De novo Rna Assembly Pipeline allowing to clean and filter RNA-seq De novo assemblers results to get the most compact and complete set of transcripts.

PCS (Portail Calcul Scientfique) - Ingenum

RECORD platform Web Development - espace de développements Web de la plate-forme RECORD effectués autour de modèles RECORD (prototype d'outil, réutilisabilité de code).