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Construction and Analysis of Protein-Protein Interactions (PPI) NETWORKS for complexes and biological processes

GSpace is a simulator for large genomic data, based on a generation-by-generation coalescent that takes into account small population size, recombination, and isolation by distance.

Public DHM repository

Computes soil moisture over agricultural areas

mechanistic-statistical environement

https://olivier.bonnefon.pages.mia.inra.fr/mse/

PAPPSOms++ is a comprehensive C++ library including useful functions to handle mass spectrometric data, either in a proteomics setting or for data visualization. Abstractions include peptides, proteins, isotopic clusters, mass/drift spectra...

Algorithms for dense linear systems and used for Finites Elements Method. Simulators codes.

toolbar is an exact discrete optimization tool for graphical models. For most use cases, it has been obsoleted by toulbar2 (on GitHub).

This a the private clone archive of toulbar2. The real project is on GitHub. This one contains the "diverse solution" branch that needs to be pulled in the main repo (master)

R'MES is a tool for studying word frequencies in biological sequences.