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The aim of this project is to provide an R package for big integer (and big rational) computations. This is achieved via an C++ interface to the GNU MP ("GMP") library, and S3 classes "bigz", "bigq", etc.
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ViSEAGO: Easier data mining of biological functions organized into clusters using Gene Ontology and semantic similarity. Visualization, Semantic similarity and Enrichment Analysis of Gene Ontology.
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Supports pour la formation shiny - Plateforme de Biostatistique – Génopole Toulouse Midi-Pyrénées
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Stacomi / stacomirtools
GNU General Public License v3.0 or laterDatabase connection utilities, RODBC and pool
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Stacomi / stacoshiny
MIT LicenseUpdated -
IRHS-Bioinfo / BiSePS
MIT LicenseBisulfite Sequencing Processing Software : Snakemake Pipeline
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PAPPSO / xtpcpp
GNU General Public License v3.0 onlyX!TandemPipeline is a free software (GPL v3) that helps you to filter and group your peptide/protein identifications from MS/MS mass spectra.
Publication: J. Proteome Res. 2017, 16, 2, 494–503 -- https://doi.org/10.102
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Mathieu Buoro / IBASAM
GNU General Public License v3.0 onlyA demo-genetic individual-based model for Atlantic salmon populations
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umrf / dairydb
GNU General Public License v3.0 onlyUpdated -
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Dimitri Szabo / LicenseWaiverMaker
MIT LicenseA simple R package to create specific license waivers to add in Dataverse
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Stacomi / stacomiR
GNU General Public License v3.0 or laterFish migration monitoring, database connection and treatment
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Sandra Pelletier / anaDiff
CeCILL Free Software License Agreement v2.1Transcriptomic analysis, microarray and rnaseq, used in IRHS unit
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TEISSEIRE EMMA / rosepigs_stomach
MIT LicenseRNAseq and EMseq analyses for the rosepigs project on stomach mucosa samples
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Jean-Matthieu Monnet / Martelo
GNU General Public License v3.0 or laterUpdated -
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Sandra Pelletier / transcriptomic_analysis_ed-vaame
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
GQE-ABISoft / SHiNeMaS
GNU Affero General Public License v3.0SHiNeMaS is a database with its web interface, dedicated to the management of the history of seed lots and related data like phenotyping, environment and cultural practices. SHiNeMaS is freely available under GNU Affero GPL Licence
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