Commits · 7796460911180dc268b50d3082fba1d0cbb1c97d · Cervin Guyomar / workflows · GitLab

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Mar 25, 2020
- Snakemake 1000RNASeq ASE: add quality trimming threshold in Trimgalore rules · 77964609
  mariabernard authored 4 years ago
  
  77964609
Mar 23, 2020
- Snakemake 1000RNASeq ASE: update config comment · 587e68eb
  mariabernard authored 4 years ago
  
  587e68eb
- Snakemake 1000RNASeq ASE : update dependency version · 7803ae62
  Maria Bernard authored 4 years ago
  
  7803ae62
Mar 13, 2020
- 1000RNASeq chicken : add new ASE pipeline · 9d4969ae
  Maria Bernard authored 5 years ago
  
  9d4969ae
- 1000RNASeq chicken : remove ASE pipeline · a4c5a1e5
  Maria Bernard authored 5 years ago
  
  a4c5a1e5
Aug 27, 2019
- 1000RNASeq : add phASER id_separator option · cf26c1ba
  mariabernard authored 5 years ago
  
  cf26c1ba
Aug 21, 2019
- 1000RNASeq ASE: change default value for call_rate_threshold in config.yaml.example · c7efe3ec
  Maria Bernard authored 5 years ago
  
  c7efe3ec
- 1000RNASeq ASE: add doc in config.yaml · 93f79fab
  Maria Bernard authored 5 years ago
  
  93f79fab
Aug 19, 2019
- 1000RNASeq/ASE : small doc and resources update · 5983b0bb
  Maria Bernard authored 5 years ago
  
  5983b0bb
- 1000RNASeq ASE : add call rate filtering · 686961f0
  Maria Bernard authored 5 years ago
  
  686961f0
Jun 19, 2019
- 1000RNASEQ chicken ASE: update dependencies in config.yaml · 5ec6c951
  mariabernard authored 5 years ago
  
  5ec6c951
Jun 07, 2019
- 1000RNASeq_chicken ASE : change tools dependencies in config.yaml · 82bf6f0c
  mariabernard authored 5 years ago
  
  82bf6f0c
- 1000RNASeq_chicken ASE : add md5sum doc in config.yaml · 28a3a595
  mariabernard authored 5 years ago
  
  28a3a595
Jun 06, 2019
- 1000RNASEQ_chicken/ASE : change GATK version · 5e2e5426
  mariabernard authored 5 years ago
  
  5e2e5426
May 16, 2019
- 1000RNASeq_chicken ASE : add ASE snakemake workflow · 1859581e
  Maria Bernard authored 5 years ago
  
  1859581e
Apr 12, 2019
- add Snakemake SNP calling on RNASeq · 70a4e071
  Maria Bernard authored 5 years ago
  
  70a4e071