BUG: remove option -w in fgrep which causes grep of genes from Unknown chromosome to fail

34abf1a4 · Helene Rimbert · 168392a6 · 34abf1a4
Commit 34abf1a4 authored 4 years ago by Helene Rimbert
--- a/rules/preprocessISBP.smk
+++ b/rules/preprocessISBP.smk
@@ -33,5 +33,5 @@ rule splitISBP:
 	params: 'Chr{chrom}'
 	shell:
 		"""
-		fgrep -w {params} {input} 1> {output} 2> {log}
+		fgrep {params} {input} 1> {output} 2> {log}
 		"""