build_variant_pop.py

@@ -495,7 +495,7 @@ def set_variant_graph(sv_sim, reference):
     for chrom, variants in sv_sim.duplications.items():
         for variant in variants:
             sv = Variant(chrom, variant['start'], variant['end'],
-                         variant['name'], variant['allele_freq'], "INV")
+                         variant['name'], variant['allele_freq'], "DUP")
             variant_set[chrom].append(sv)
 
     # split by chromosomes