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Commit 9b65b121 authored by Floreal Cabanettes's avatar Floreal Cabanettes
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Fix type of data

parent cfc46d52
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1 merge request!12Split pindel detection in 20mb windows
......@@ -72,7 +72,8 @@ class SnakemakeUtils:
inputs = []
for batch in self.chr_batches[wildcards.chrom]:
inputs.append("{batch}/pindel/pindel_{chrom}_{chrbatch}_{svtype}.gz".format(
batch=wildcards.batch, chrom=wildcards.chrom, chrbatch="to".join(batch), svtype=wildcards.svtype
batch=wildcards.batch, chrom=wildcards.chrom, chrbatch="to".join(map(str, batch)),
svtype=wildcards.svtype
))
return inputs
......
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