From 9b65b1214b3edaeda96aa892d161d2850651e3fa Mon Sep 17 00:00:00 2001
From: Floreal Cabanettes <floreal.cabanettes@inra.fr>
Date: Tue, 31 Jul 2018 14:43:22 +0200
Subject: [PATCH] Fix type of data
---
snakecnv/svsnakemake_utils.py | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/snakecnv/svsnakemake_utils.py b/snakecnv/svsnakemake_utils.py
index 655b671..2857688 100644
--- a/snakecnv/svsnakemake_utils.py
+++ b/snakecnv/svsnakemake_utils.py
@@ -72,7 +72,8 @@ class SnakemakeUtils:
inputs = []
for batch in self.chr_batches[wildcards.chrom]:
inputs.append("{batch}/pindel/pindel_{chrom}_{chrbatch}_{svtype}.gz".format(
- batch=wildcards.batch, chrom=wildcards.chrom, chrbatch="to".join(batch), svtype=wildcards.svtype
+ batch=wildcards.batch, chrom=wildcards.chrom, chrbatch="to".join(map(str, batch)),
+ svtype=wildcards.svtype
))
return inputs
--
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