Commits · f964928020a032dcb6d05832b20d8f13938f42db · PAPPSO / i2MassChroQ · GitLab

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A compter du 1er avril, attention à vos pipelines : Nouvelles limitations de Docker Hub

Dec 16, 2017
- peptide/mass are counted per valid proteins · f9649280
  Langella Olivier authored 7 years ago
  
  f9649280
Dec 07, 2017
- match long trembl accessions · eb3add26
  Langella Olivier authored 7 years ago
  
  eb3add26
Nov 25, 2017
- identification data source read and write fixed · c483a490
  Langella Olivier authored 7 years ago
  
  c483a490
Nov 24, 2017
- identification data source params written in xpip file · da90ec2c
  Langella Olivier authored 7 years ago
  
  da90ec2c
Nov 23, 2017
- WIP : copy protein dbxref list · c67e48c5
  Langella Olivier authored 7 years ago
  
  c67e48c5
- PeptideMatchParam renamed to PeptideEvidenceParam · f02ed81f
  Langella Olivier authored 7 years ago
  
  f02ed81f
Nov 22, 2017
- WIP: new xpip parser · a337dff2
  Langella Olivier authored 7 years ago
  
  a337dff2
- xtpcpp (0.2.1-1) stretch · 69f3124c
  Langella Olivier authored 7 years ago
  
  xtpcpp_0.2.1-1
  
  69f3124c
- peptide evidence store seems to work · 97b07e8b
  Langella Olivier authored 7 years ago
  
  97b07e8b
Nov 21, 2017
- check that output directory is writable · 4b7d724c
  Langella Olivier authored 7 years ago
  
  4b7d724c
Nov 20, 2017
- WIP: refactoring using PeptideEvidence · 58f57e45
  Langella Olivier authored 7 years ago
  
  58f57e45
Nov 18, 2017
- WIP: new peptide evidence object, huge work to do · 7773df8a
  Langella Olivier authored 7 years ago
  
  7773df8a
- WIP: new peptide evidence object, huge work to do · c8b65e1b
  Langella Olivier authored 7 years ago
  
  c8b65e1b
- WIP: new peptide match store object · acb5d436
  Langella Olivier authored 7 years ago
  
  acb5d436
- WIP: xpip format, need to dedup peptide match · 02cc8df7
  Langella Olivier authored 7 years ago
  
  02cc8df7
Nov 17, 2017
- WIP: xpip file input and output · 514181de
  Langella Olivier authored 7 years ago
  
  514181de
- new file to parse new xpip format · b7ce3ca0
  Langella Olivier authored 7 years ago
  
  b7ce3ca0
- new file to parse new xpip format · cf51c5c7
  Langella Olivier authored 7 years ago
  
  cf51c5c7
Nov 16, 2017
- xpip output almost done · 22d2e76e
  Langella Olivier authored 7 years ago
  
  22d2e76e
- xpip export system is going on · 9393c31c
  Langella Olivier authored 7 years ago
  
  9393c31c
Nov 15, 2017
- get only amino acids one letter code to compute protein mass or count tryptic peptides · 1f1791fd
  Langella Olivier authored 7 years ago
  
  1f1791fd
Nov 06, 2017
- fastafile object has an xml id · ffe43691
  Langella Olivier authored 7 years ago
  
  ffe43691
- handle decoy and contaminant filter status, more information in ODS output · 1dd2746f
  Langella Olivier authored 7 years ago
  
  1dd2746f
- xtpcpp (0.1.22-2) stretch · 7870c2d4
  Langella Olivier authored 7 years ago
  
  xtpcpp_0.1.22-2
  
  7870c2d4
Oct 29, 2017
- control HTCondor memory requirement in tandem window dialog · b31cf1f0
  Olivier Langella authored 7 years ago
  
  b31cf1f0
Oct 27, 2017
- get only amino acid sequence to compute number of theoretical peptides · e952b82b
  Langella Olivier authored 7 years ago
  
  e952b82b
Oct 26, 2017
- building new xpip file · 17adc62b
  Langella Olivier authored 7 years ago
  
  17adc62b
Oct 21, 2017
- monitoring grouping · a04b739c
  Langella Olivier authored 7 years ago
  
  a04b739c
Oct 14, 2017
- tandem parameter form OK · ee494073
  Langella Olivier authored 7 years ago
  
  ee494073
- refinement module form OK · 5ef49a4f
  Langella Olivier authored 7 years ago
  
  5ef49a4f
- WIP: refinement module · e786ed45
  Langella Olivier authored 7 years ago
  
  e786ed45
Oct 13, 2017
- WIP refine form · 18eabb6c
  Langella Olivier authored 7 years ago
  
  18eabb6c
- scoring form ok · 09a1c5b5
  Langella Olivier authored 7 years ago
  
  09a1c5b5
Oct 12, 2017
- begining scoring form · 95aea211
  Langella Olivier authored 7 years ago
  
  95aea211
Oct 11, 2017
- residue form completed · 8202716e
  Langella Olivier authored 7 years ago
  
  8202716e
Oct 09, 2017
- xtpcpp (0.1.19-1) stretch · c3422bae
  Langella Olivier authored 7 years ago
  
  xtpcpp_0.1.19-1
  
  c3422bae
Oct 08, 2017
- protein and peptide moiety · 843e8359
  Langella Olivier authored 7 years ago
  
  843e8359
- spectrum form completed · 5c313611
  Langella Olivier authored 7 years ago
  
  5c313611
- spectrum parameters · 102fea87
  Langella Olivier authored 7 years ago
  
  102fea87
- spectrum total peaks · 862002dd
  Langella Olivier authored 7 years ago
  
  862002dd