Commits · d432d1ae140a5574594494ea0ac147b0fb4db55e · PAPPSO / i2MassChroQ · GitLab

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Jul 12, 2013
- Add 2 ods result files for futur export, modified masschroml default parameter · d432d1ae
  Benoit Valot, the BEST authored 11 years ago
  
  d432d1ae
- comments added in PROTICdbml Output · 9d9cb651
  Olivier Langella authored 11 years ago
  
  9d9cb651
Jul 10, 2013
- xtandempipeline (3.3.1-10) wheezy · 41c08612
  Olivier Langella authored 11 years ago
  
  41c08612
- Ods2Csv bug found by T. Balliau is fixed · 53d25e72
  Olivier Langella authored 11 years ago
  
  53d25e72
Jul 09, 2013
- xtandempipeline (3.3.1-9) wheezy; · 513f8413
  Olivier Langella authored 11 years ago
  
  513f8413
- mh renamed to mhDiff in PeptideMass · fe86b30b
  Olivier Langella authored 11 years ago
  
  fe86b30b
- PROTICdbML output takes into account the current XPIP file · cf933df0
  Olivier Langella authored 11 years ago
  
  PROTICdbML output are forbidden if there is no current XPIP file
  cf933df0
- new XpipFile object to handle xpip data source either from a file or an URL · 47eda21c
  Olivier Langella authored 11 years ago
  
  47eda21c
- ignore mascodat log4j file · cd7c78bb
  Olivier Langella authored 11 years ago
  
  cd7c78bb
- Mascot Evalue could be choice between experimental and theoritical · a858165d
  Benoit Valot, the BEST authored 11 years ago
  
  a858165d
Jul 08, 2013
- mascotdatfile-3.4.9.jar included · cc1bd864
  Olivier Langella authored 11 years ago
  
  need some tests
  cc1bd864
- xtandempipeline (3.3.1-8) wheezy · c08afc96
  Olivier Langella authored 11 years ago
  
  c08afc96
- Add support of mgf title · 0641aa78
  Benoit Valot, the BEST authored 11 years ago
  
  0641aa78
- peptideMass unicity revised : ordered by sequenceLi + modification mass · 64c58662
  Olivier Langella authored 11 years ago
  
  64c58662
Jul 05, 2013
- ignore build.xml file · 4b2a3af0
  Olivier Langella authored 11 years ago
  
  4b2a3af0
- extract the MSMS data source file from xtandem results · 64a52785
  Olivier Langella authored 11 years ago
  
  64a52785
- bug fixed on IdentificationDataSource that was compromising data source unicity · b32bb43a
  Olivier Langella authored 11 years ago
  
  extract model file name to write in proticDbMl files
  b32bb43a
- working on the protic db ml output : · bce1d345
  Olivier Langella authored 11 years ago
  
  getting more informations about xtandem results
  bce1d345
Jul 04, 2013
- xtandempipeline (3.3.1-7) wheezy · ab1d58a1
  Olivier Langella authored 11 years ago
  
  ab1d58a1
- printing system refactored : deleting special ods output functions · de71549e
  Olivier Langella authored 11 years ago
  
  de71549e
- problem of unicity fixed in peptideMassSet · 8dd466ba
  Olivier Langella authored 11 years ago
  
  8dd466ba
- util static functions added in Utils.java object · f4b5577f
  Olivier Langella authored 11 years ago
  
  numbering peptide implemented in ods peptide output and proticdbml output
  f4b5577f
- Clean build.xml · ecdece2f
  Benoit Valot, the BEST authored 11 years ago
  
  ecdece2f
Jul 03, 2013
- PeptideMass numbering system · 544b5b90
  Olivier Langella authored 11 years ago
  
  544b5b90
- introducing a new XtandemModelFile class and modifications of xtandem analysis classes to use it · 1e279576
  Olivier Langella authored 11 years ago
  
  ant files modified to try to run it from ant command line
  1e279576
- new run target · 9b13f8d6
  Olivier Langella authored 11 years ago
  
  9b13f8d6
Jun 28, 2013
- new function to write cvParams · a748bb61
  Olivier Langella authored 11 years ago
  
  new function to write the PAPPSO grouping number code
  a748bb61
- xtandempipeline (3.3.1-6) · b1a841df
  Olivier Langella authored 11 years ago
  
  new cvParam in proteinHit PROTICdbMl output
  b1a841df
Jun 25, 2013
- print 0 and not null in ods compar file · ab99aa78
  Olivier Langella authored 11 years ago
  
  ab99aa78
- xtandempipeline (3.3.1-5) wheezy · 67e5ed06
  Olivier Langella authored 11 years ago
  
  67e5ed06
- bud detected by Thierry Balliau fixed on csv empty cells · d17ea496
  Olivier Langella authored 11 years ago
  
  d17ea496
Jun 24, 2013
- changelog updated · a2313a27
  Olivier Langella authored 11 years ago
  
  a2313a27
- bug on peptide compar specific output (found by Thierry Balliau) fixed · 5239122a
  Olivier Langella authored 11 years ago
  
  5239122a
Jun 23, 2013
- better regexp to extract X!Tandem version number · 44d36f78
  Olivier Langella authored 11 years ago
  
  44d36f78
Jun 21, 2013
- better Debian package settings · cd70ca20
  Olivier Langella authored 11 years ago
  
  cd70ca20
Jun 20, 2013
- Merge branch 'master' of ssh://git.renater.fr:2222/xtandempipeline · 40a54776
  Olivier Langella authored 11 years ago
  
  40a54776
- getting X!Tandem version from the conf object · 7a456e4e
  Olivier Langella authored 11 years ago
  
  7a456e4e
Jun 17, 2013
- xtandempipeline (3.3.1-3) wheezy package · 353407c8
  Olivier Langella authored 11 years ago
  
  353407c8
- bug fixed trying to detect windows file path · 75a9047f
  Olivier Langella authored 11 years ago
  
  75a9047f
- better peptide output · 9c37f77c
  Olivier Langella authored 11 years ago
  
  9c37f77c