Commits · 8df7c244e926edc396e790d34a7059b87a813cff · PAPPSO / i2MassChroQ · GitLab

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Oct 07, 2019
- first modification to add msRunId view · 8df7c244
  Renne Thomas authored 5 years ago
  
  8df7c244
Oct 03, 2019
- Correct bug check protein doesnt work · 8cfc2b87
  Renne Thomas authored 5 years ago
  
  8cfc2b87
Oct 02, 2019
- undo the doc deletion · d70a25c9
  Renne Thomas authored 5 years ago
  
  d70a25c9
- Remove noise suppression · 5bc1c1e1
  Renne Thomas authored 5 years ago
  
  5bc1c1e1
- Correct output and remove residu potential modif 1, 2 · 60bbae60
  Renne Thomas authored 5 years ago
  
  60bbae60
- Remove output mzid line · 86da5409
  Renne Thomas authored 5 years ago
  
  86da5409
Sep 17, 2019
- WIP: writing q-values in ODS file · c9ce7ea2
  Langella Olivier authored 5 years ago
  
  c9ce7ea2
Sep 16, 2019
- WIP: exporting q-values in ODS · 30f99ca7
  Langella Olivier authored 5 years ago
  
  30f99ca7
Sep 05, 2019
- q-value can be computed on Mascot results · 6b7a60c1
  Langella Olivier authored 5 years ago
  
  6b7a60c1
- better english · b6b7dd24
  Langella Olivier authored 5 years ago
  
  b6b7dd24
- better code to check peptide validity, new tooltips very helpfull in dialog box · c11368ee
  Langella Olivier authored 5 years ago
  
  c11368ee
- use size_t instead of unsigned int to count · cf0f0a31
  Langella Olivier authored 5 years ago
  
  cf0f0a31
- first running version with filter on q-value · 25f409fc
  Langella Olivier authored 5 years ago
  
  25f409fc
- first running version with filter on q-value · 4fd1bcd4
  Langella Olivier authored 5 years ago
  
  4fd1bcd4
- make use of central util function to compute FDR the same way everywhere · 69a31064
  Langella Olivier authored 5 years ago
  
  69a31064
Sep 04, 2019
- WIP: new utils function to compute FDR in one place... and may be change it easily · e0f889c0
  Langella Olivier authored 5 years ago
  
  e0f889c0
- computing q-values for tandem identifications · 5eb5b095
  Langella Olivier authored 5 years ago
  
  5eb5b095
- WIP: computing q-values · 5f56a0d8
  Langella Olivier authored 5 years ago
  
  5f56a0d8
Sep 03, 2019
- FDR computation not obvious, keeping legacy method · 29d7c0d4
  Langella Olivier authored 5 years ago
  
  29d7c0d4
- FDR computation not obvious, keeping legacy method · 1c673941
  Langella Olivier authored 5 years ago
  
  1c673941
- fixing underestimation of FDR : this should be doubled, prior to Joshua et al 2007 · 812fa959
  Langella Olivier authored 5 years ago
  
  812fa959
Aug 22, 2019
- better error messages, MS run file check is made by workerthread · fdc69f0e
  Langella Olivier authored 5 years ago
  
  fdc69f0e
Aug 06, 2019
- reads and writes contaminant removal mode in xpip files · 44133390
  Langella Olivier authored 5 years ago
  
  44133390
- user interface to select contaminant removal mode · dc3dbb36
  Langella Olivier authored 5 years ago
  
  dc3dbb36
Aug 05, 2019
- use of contaminant removal mode in projects, read and write new contaminant... · 29e445f6
  Langella Olivier authored 5 years ago
  
  use of contaminant removal mode in projects, read and write new contaminant removal mode from XPIP files
  29e445f6
Jul 29, 2019
- new feature to take into account different ways of removing contaminants · 321afbbe
  Langella Olivier authored 5 years ago
  
  321afbbe
- forgotten evalue return · b87ced60
  Langella Olivier authored 5 years ago
  
  b87ced60
- pragma once in header · e146aa3b
  Langella Olivier authored 5 years ago
  
  e146aa3b
Jul 16, 2019
- preparing 0.2.39 · 648354fb
  Langella Olivier authored 5 years ago
  
  648354fb
- generate mcqml without peptide labels: needs test · b4b7b1af
  Langella Olivier authored 5 years ago
  
  b4b7b1af
Jul 05, 2019
- find spectrum directly by index if scan number is not supported · 5ab5980f
  Langella Olivier authored 5 years ago
  
  5ab5980f
Jun 18, 2019
- xtpcpp (0.2.38-4) stretch · c3a3762d
  Langella Olivier authored 5 years ago
  
  View commits for tag xtpcpp_0.2.38-4 xtpcpp_0.2.38-4
  
  c3a3762d
- xtpcpp (0.2.38-3) stretch · 0b1219d8
  Langella Olivier authored 5 years ago
  
  View commits for tag xtpcpp_0.2.38-3 xtpcpp_0.2.38-3
  
  0b1219d8
- xtpcpp (0.2.38-2) stretch · 2609d986
  Langella Olivier authored 5 years ago
  
  View commits for tag xtpcpp_0.2.38-2 xtpcpp_0.2.38-2
  
  2609d986
Jun 17, 2019
- xtpcpp (0.2.38-1) stretch · e9d0f15d
  Langella Olivier authored 5 years ago
  
  View commits for tag xtpcpp_0.2.38-1 xtpcpp_0.2.38-1
  
  e9d0f15d
Jun 14, 2019
- progress bar to look for best msrun retention time · e99f8ce8
  Langella Olivier authored 5 years ago
  
  e99f8ce8
Jun 13, 2019
- look for the best msrun reference in the main window worker thread · 039c8a8c
  Langella Olivier authored 5 years ago
  
  039c8a8c
- accepts tandem TPP version · 51648010
  Langella Olivier authored 5 years ago
  
  51648010
- GUI updated to choose msrun for alignment either automatic or manual · a539f35a
  Langella Olivier authored 5 years ago
  
  a539f35a
- first msrun reference finder · 6d2a9bb6
  Langella Olivier authored 5 years ago
  
  6d2a9bb6