Commits · 60bbae60696bdf9d2bffb4ceec944a17ba74ebb9 · PAPPSO / i2MassChroQ · GitLab

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Oct 02, 2019
- Correct output and remove residu potential modif 1, 2 · 60bbae60
  Renne Thomas authored 5 years ago
  
  60bbae60
- Remove output mzid line · 86da5409
  Renne Thomas authored 5 years ago
  
  86da5409
Sep 16, 2019
- WIP: exporting q-values in ODS · 30f99ca7
  Langella Olivier authored 5 years ago
  
  30f99ca7
Sep 05, 2019
- better english · b6b7dd24
  Langella Olivier authored 5 years ago
  
  b6b7dd24
- better code to check peptide validity, new tooltips very helpfull in dialog box · c11368ee
  Langella Olivier authored 5 years ago
  
  c11368ee
- use size_t instead of unsigned int to count · cf0f0a31
  Langella Olivier authored 5 years ago
  
  cf0f0a31
- first running version with filter on q-value · 4fd1bcd4
  Langella Olivier authored 5 years ago
  
  4fd1bcd4
- make use of central util function to compute FDR the same way everywhere · 69a31064
  Langella Olivier authored 5 years ago
  
  69a31064
Sep 04, 2019
- computing q-values for tandem identifications · 5eb5b095
  Langella Olivier authored 5 years ago
  
  5eb5b095
Sep 03, 2019
- FDR computation not obvious, keeping legacy method · 29d7c0d4
  Langella Olivier authored 5 years ago
  
  29d7c0d4
- fixing underestimation of FDR : this should be doubled, prior to Joshua et al 2007 · 812fa959
  Langella Olivier authored 5 years ago
  
  812fa959
Aug 22, 2019
- better error messages, MS run file check is made by workerthread · fdc69f0e
  Langella Olivier authored 5 years ago
  
  fdc69f0e
Aug 06, 2019
- reads and writes contaminant removal mode in xpip files · 44133390
  Langella Olivier authored 5 years ago
  
  44133390
- user interface to select contaminant removal mode · dc3dbb36
  Langella Olivier authored 5 years ago
  
  dc3dbb36
Aug 05, 2019
- use of contaminant removal mode in projects, read and write new contaminant... · 29e445f6
  Langella Olivier authored 5 years ago
  
  use of contaminant removal mode in projects, read and write new contaminant removal mode from XPIP files
  29e445f6
Jun 18, 2019
- xtpcpp (0.2.38-4) stretch · c3a3762d
  Langella Olivier authored 5 years ago
  
  xtpcpp_0.2.38-4
  
  c3a3762d
- xtpcpp (0.2.38-2) stretch · 2609d986
  Langella Olivier authored 5 years ago
  
  xtpcpp_0.2.38-2
  
  2609d986
Jun 17, 2019
- xtpcpp (0.2.38-1) stretch · e9d0f15d
  Langella Olivier authored 5 years ago
  
  xtpcpp_0.2.38-1
  
  e9d0f15d
Jun 14, 2019
- progress bar to look for best msrun retention time · e99f8ce8
  Langella Olivier authored 5 years ago
  
  e99f8ce8
Jun 13, 2019
- look for the best msrun reference in the main window worker thread · 039c8a8c
  Langella Olivier authored 5 years ago
  
  039c8a8c
- GUI updated to choose msrun for alignment either automatic or manual · a539f35a
  Langella Olivier authored 5 years ago
  
  a539f35a
- first msrun reference finder · 6d2a9bb6
  Langella Olivier authored 5 years ago
  
  6d2a9bb6
- tpp tandem version compliant · d3d09069
  Langella Olivier authored 5 years ago
  
  d3d09069
Jun 12, 2019
- stronger tandem parameter file parser · 8a796ad0
  Langella Olivier authored 5 years ago
  
  8a796ad0
- wip: accept weak tandem parameter files · 8271f8f9
  Langella Olivier authored 5 years ago
  
  8271f8f9
Jun 10, 2019
- WIP: finding best msrun for alignment reference · 83e75fdc
  Langella Olivier authored 5 years ago
  
  83e75fdc
Jun 09, 2019
- WIP: using msrunretention object · 9225e6b9
  Langella Olivier authored 5 years ago
  
  9225e6b9
- WIP: using msrunretention object · cd0259e3
  Langella Olivier authored 5 years ago
  
  cd0259e3
Jun 08, 2019
- first code using new msrunretentiontime API · ac2ba266
  Langella Olivier authored 5 years ago
  
  ac2ba266
Jun 06, 2019
- new pappso ms ++ API updates · 87678884
  Langella Olivier authored 5 years ago
  
  87678884
- WIP: using new pappsoms++ library · 98f77814
  Langella Olivier authored 5 years ago
  
  98f77814
May 28, 2019
- max or sum selection bug fixed · 78897e15
  Langella Olivier authored 5 years ago
  
  78897e15
May 11, 2019
- build tandem run dialog only when it is required · 19188f70
  Langella Olivier authored 5 years ago
  
  19188f70
May 10, 2019
- refactoring : xic peak renamed · 284269b1
  Langella Olivier authored 5 years ago
  
  284269b1
May 09, 2019
- first test OK with new pappso ms ++ library · bd4f789b
  Langella Olivier authored 5 years ago
  
  bd4f789b
May 07, 2019
- new PAPPSO C++ library · 1007066a
  Langella Olivier authored 5 years ago
  
  1007066a
May 01, 2019
- WIP: new xic extractor API · 357e9b7c
  Langella Olivier authored 5 years ago
  
  357e9b7c
Mar 29, 2019
- new control on tandem.exe binary file · 6524a5f8
  Langella Olivier authored 6 years ago
  
  6524a5f8
Mar 22, 2019
- new filter on peprepro seems OK · 67195bf0
  Langella Olivier authored 6 years ago
  
  67195bf0
Mar 18, 2019
- fix empty filename on cancel · 703d7907
  Langella Olivier authored 6 years ago
  
  703d7907