Commits · 3bea226724ada326d07637ef3582d12f650b3dc5 · PAPPSO / i2MassChroQ · GitLab

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Jan 09, 2018
- better individual project mode · 3bea2267
  Langella Olivier authored 7 years ago
  
  3bea2267
- replacing identifications tabs with combo box · ff2bd115
  Langella Olivier authored 7 years ago
  
  ff2bd115
Dec 17, 2017
- refactoring · 9b3b8529
  Langella Olivier authored 7 years ago
  
  9b3b8529
- new function to get mass delta in ppm · 51144af4
  Langella Olivier authored 7 years ago
  
  51144af4
- compute FDR on peptide evidence instead of peptide match · feb7697e
  Langella Olivier authored 7 years ago
  
  feb7697e
Dec 16, 2017
- change in mass delta compute : a peptide evidence is only counted once · a9ecf09d
  Langella Olivier authored 7 years ago
  
  a9ecf09d
- peptide/mass are counted per valid proteins · f9649280
  Langella Olivier authored 7 years ago
  
  f9649280
Dec 07, 2017
- match long trembl accessions · eb3add26
  Langella Olivier authored 7 years ago
  
  eb3add26
Nov 25, 2017
- identification data source read and write fixed · c483a490
  Langella Olivier authored 7 years ago
  
  c483a490
Nov 24, 2017
- identification data source params written in xpip file · da90ec2c
  Langella Olivier authored 7 years ago
  
  da90ec2c
Nov 23, 2017
- WIP : copy protein dbxref list · c67e48c5
  Langella Olivier authored 7 years ago
  
  c67e48c5
- PeptideMatchParam renamed to PeptideEvidenceParam · f02ed81f
  Langella Olivier authored 7 years ago
  
  f02ed81f
Nov 22, 2017
- WIP: new xpip parser · a337dff2
  Langella Olivier authored 7 years ago
  
  a337dff2
- xtpcpp (0.2.1-1) stretch · 69f3124c
  Langella Olivier authored 7 years ago
  
  View commits for tag xtpcpp_0.2.1-1 xtpcpp_0.2.1-1
  
  69f3124c
- peptide evidence store seems to work · 97b07e8b
  Langella Olivier authored 7 years ago
  
  97b07e8b
Nov 21, 2017
- check that output directory is writable · 4b7d724c
  Langella Olivier authored 7 years ago
  
  4b7d724c
Nov 20, 2017
- WIP: refactoring using PeptideEvidence · 58f57e45
  Langella Olivier authored 7 years ago
  
  58f57e45
Nov 18, 2017
- WIP: new peptide evidence object, huge work to do · 7773df8a
  Langella Olivier authored 7 years ago
  
  7773df8a
- WIP: new peptide evidence object, huge work to do · c8b65e1b
  Langella Olivier authored 7 years ago
  
  c8b65e1b
- WIP: new peptide match store object · acb5d436
  Langella Olivier authored 7 years ago
  
  acb5d436
- WIP: xpip format, need to dedup peptide match · 02cc8df7
  Langella Olivier authored 7 years ago
  
  02cc8df7
Nov 17, 2017
- WIP: xpip file input and output · 514181de
  Langella Olivier authored 7 years ago
  
  514181de
- new file to parse new xpip format · b7ce3ca0
  Langella Olivier authored 7 years ago
  
  b7ce3ca0
- new file to parse new xpip format · cf51c5c7
  Langella Olivier authored 7 years ago
  
  cf51c5c7
Nov 16, 2017
- xpip output almost done · 22d2e76e
  Langella Olivier authored 7 years ago
  
  22d2e76e
- xpip export system is going on · 9393c31c
  Langella Olivier authored 7 years ago
  
  9393c31c
Nov 15, 2017
- get only amino acids one letter code to compute protein mass or count tryptic peptides · 1f1791fd
  Langella Olivier authored 7 years ago
  
  1f1791fd
Nov 06, 2017
- fastafile object has an xml id · ffe43691
  Langella Olivier authored 7 years ago
  
  ffe43691
- handle decoy and contaminant filter status, more information in ODS output · 1dd2746f
  Langella Olivier authored 7 years ago
  
  1dd2746f
- xtpcpp (0.1.22-2) stretch · 7870c2d4
  Langella Olivier authored 7 years ago
  
  View commits for tag xtpcpp_0.1.22-2 xtpcpp_0.1.22-2
  
  7870c2d4
Oct 29, 2017
- control HTCondor memory requirement in tandem window dialog · b31cf1f0
  Olivier Langella authored 7 years ago
  
  b31cf1f0
Oct 27, 2017
- get only amino acid sequence to compute number of theoretical peptides · e952b82b
  Langella Olivier authored 7 years ago
  
  e952b82b
Oct 26, 2017
- building new xpip file · 17adc62b
  Langella Olivier authored 7 years ago
  
  17adc62b
Oct 21, 2017
- monitoring grouping · a04b739c
  Langella Olivier authored 7 years ago
  
  a04b739c
Oct 14, 2017
- tandem parameter form OK · ee494073
  Langella Olivier authored 7 years ago
  
  ee494073
- refinement module form OK · 5ef49a4f
  Langella Olivier authored 7 years ago
  
  5ef49a4f
- WIP: refinement module · e786ed45
  Langella Olivier authored 7 years ago
  
  e786ed45
Oct 13, 2017
- WIP refine form · 18eabb6c
  Langella Olivier authored 7 years ago
  
  18eabb6c
- scoring form ok · 09a1c5b5
  Langella Olivier authored 7 years ago
  
  09a1c5b5
Oct 12, 2017
- begining scoring form · 95aea211
  Langella Olivier authored 7 years ago
  
  95aea211