adapting for windows

.babelrc

.gitignore

.gitlab-ci.yml

.gitmodules

LICENSE

README.md

hooks.js

package.json

resources/adapters/NexteraPE-PE.fa

resources/adapters/TruSeq2-PE.fa

resources/adapters/TruSeq2-SE.fa

resources/adapters/TruSeq3-PE-2.fa

resources/adapters/TruSeq3-PE.fa

resources/adapters/TruSeq3-SE.fa

resources/mongoWindows.yaml

resources/mongodbLinux.yaml

resources/mongodbMac.yaml

resources/snakeMinimal.yaml

resources/snakemakeLinux.yaml

resources/snakemakeMac.yaml