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Commit aef04521 authored by BOUANICH ANDREA's avatar BOUANICH ANDREA
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update fisher exact

parent 28e50a06
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data/data_test.csv
+ 86
− 86
View file @ aef04521
...@@ -3245,57 +3245,57 @@ ...@@ -3245,57 +3245,57 @@
3243,Chr01,MD01G1003700,unique homolog,Multiple TE,4,518 3243,Chr01,MD01G1003700,unique homolog,Multiple TE,4,518
3244,Chr01,MD01G1003800,multiple homolog,Multiple TE,5,498 3244,Chr01,MD01G1003800,multiple homolog,Multiple TE,5,498
3245,Chr01,MD01G1003900,multiple homolog,Multiple TE,7,501 3245,Chr01,MD01G1003900,multiple homolog,Multiple TE,7,501
3246,Chr01,MD01G1004000,unique homolog,Multiple TE,4,495 3246,Chr01,MD01G1004000,multiple homolog,Multiple TE,4,495
3247,Chr01,MD01G1004100,multiple homolog,Multiple TE,4,508 3247,Chr01,MD01G1004100,multiple homolog,Multiple TE,4,508
3248,Chr01,MD01G1004200,unique homolog,Multiple TE,5,483 3248,Chr01,MD01G1004200,multiple homolog,Multiple TE,5,483
3249,Chr01,MD01G1004300,unique homolog,Multiple TE,4,489 3249,Chr01,MD01G1004300,multiple homolog,Multiple TE,4,489
3250,Chr01,MD01G1004400,multiple homolog,Multiple TE,4,513 3250,Chr01,MD01G1004400,multiple homolog,Multiple TE,4,513
3251,Chr01,MD01G1004500,multiple homolog,Multiple TE,3,517 3251,Chr01,MD01G1004500,multiple homolog,Multiple TE,3,517
3252,Chr01,MD01G1004600,unique homolog,Multiple TE,4,464 3252,Chr01,MD01G1004600,multiple homolog,Multiple TE,4,464
3253,Chr01,MD01G1004700,multiple homolog,Multiple TE,6,518 3253,Chr01,MD01G1004700,multiple homolog,Multiple TE,6,518
3254,Chr01,MD01G1004800,unique homolog,Multiple TE,6,501 3254,Chr01,MD01G1004800,multiple homolog,Multiple TE,6,501
3255,Chr01,MD01G1004900,unique homolog,Multiple TE,4,488 3255,Chr01,MD01G1004900,multiple homolog,Multiple TE,4,488
3256,Chr01,MD01G1005000,multiple homolog,Multiple TE,2,500 3256,Chr01,MD01G1005000,multiple homolog,Multiple TE,2,500
3257,Chr01,MD01G1005100,multiple homolog,Multiple TE,6,517 3257,Chr01,MD01G1005100,multiple homolog,Multiple TE,6,517
3258,Chr01,MD01G1005200,unique homolog,Multiple TE,7,509 3258,Chr01,MD01G1005200,multiple homolog,Multiple TE,7,509
3259,Chr01,MD01G1005300,multiple homolog,Multiple TE,4,486 3259,Chr01,MD01G1005300,multiple homolog,Multiple TE,4,486
3260,Chr01,MD01G1005400,unique homolog,Multiple TE,6,491 3260,Chr01,MD01G1005400,multiple homolog,Multiple TE,6,491
3261,Chr01,MD01G1005500,unique homolog,Multiple TE,5,484 3261,Chr01,MD01G1005500,multiple homolog,Multiple TE,5,484
3262,Chr01,MD01G1005600,multiple homolog,Multiple TE,4,489 3262,Chr01,MD01G1005600,multiple homolog,Multiple TE,4,489
3263,Chr01,MD01G1005700,multiple homolog,Multiple TE,6,504 3263,Chr01,MD01G1005700,multiple homolog,Multiple TE,6,504
3264,Chr01,MD01G1005800,unique homolog,Multiple TE,3,512 3264,Chr01,MD01G1005800,multiple homolog,Multiple TE,3,512
3265,Chr01,MD01G1005900,multiple homolog,Multiple TE,7,496 3265,Chr01,MD01G1005900,multiple homolog,Multiple TE,7,496
3266,Chr01,MD01G1006000,multiple homolog,Multiple TE,2,514 3266,Chr01,MD01G1006000,multiple homolog,Multiple TE,2,514
3267,Chr01,MD01G1006100,unique homolog,Multiple TE,5,511 3267,Chr01,MD01G1006100,multiple homolog,Multiple TE,5,511
3268,Chr01,MD01G1006200,multiple homolog,Multiple TE,4,502 3268,Chr01,MD01G1006200,multiple homolog,Multiple TE,4,502
3269,Chr01,MD01G1006300,multiple homolog,Multiple TE,6,495 3269,Chr01,MD01G1006300,multiple homolog,Multiple TE,6,495
3270,Chr01,MD01G1006400,unique homolog,Multiple TE,5,498 3270,Chr01,MD01G1006400,multiple homolog,Multiple TE,5,498
3271,Chr01,MD01G1006500,multiple homolog,Multiple TE,4,512 3271,Chr01,MD01G1006500,multiple homolog,Multiple TE,4,512
3272,Chr01,MD01G1006600,unique homolog,Multiple TE,7,493 3272,Chr01,MD01G1006600,multiple homolog,Multiple TE,7,493
3273,Chr01,MD01G1006700,unique homolog,Multiple TE,5,506 3273,Chr01,MD01G1006700,multiple homolog,Multiple TE,5,506
3274,Chr01,MD01G1006800,multiple homolog,Multiple TE,5,504 3274,Chr01,MD01G1006800,multiple homolog,Multiple TE,5,504
3275,Chr01,MD01G1006900,multiple homolog,Multiple TE,6,498 3275,Chr01,MD01G1006900,multiple homolog,Multiple TE,6,498
3276,Chr01,MD01G1007000,unique homolog,Multiple TE,5,507 3276,Chr01,MD01G1007000,multiple homolog,Multiple TE,5,507
3277,Chr01,MD01G1007100,multiple homolog,Multiple TE,6,504 3277,Chr01,MD01G1007100,multiple homolog,Multiple TE,6,504
3278,Chr01,MD01G1007200,multiple homolog,Multiple TE,3,497 3278,Chr01,MD01G1007200,multiple homolog,Multiple TE,3,497
3279,Chr01,MD01G1007300,unique homolog,Multiple TE,2,531 3279,Chr01,MD01G1007300,multiple homolog,Multiple TE,2,531
3280,Chr01,MD01G1007400,multiple homolog,Multiple TE,6,497 3280,Chr01,MD01G1007400,multiple homolog,Multiple TE,6,497
3281,Chr01,MD01G1007500,multiple homolog,Multiple TE,5,513 3281,Chr01,MD01G1007500,multiple homolog,Multiple TE,5,513
3282,Chr01,MD01G1007600,unique homolog,Multiple TE,3,487 3282,Chr01,MD01G1007600,multiple homolog,Multiple TE,3,487
3283,Chr01,MD01G1007700,multiple homolog,Multiple TE,7,539 3283,Chr01,MD01G1007700,multiple homolog,Multiple TE,7,539
3284,Chr01,MD01G1007800,singleton,Multiple TE,4,494 3284,Chr01,MD01G1007800,singleton,Multiple TE,4,494
3285,Chr01,MD01G1007900,singleton,Multiple TE,2,494 3285,Chr01,MD01G1007900,singleton,Multiple TE,2,494
3286,Chr01,MD01G1008000,multiple homolog,Multiple TE,5,490 3286,Chr01,MD01G1008000,multiple homolog,Multiple TE,5,490
3287,Chr01,MD01G1008100,multiple homolog,Multiple TE,2,516 3287,Chr01,MD01G1008100,multiple homolog,Multiple TE,2,516
3288,Chr01,MD01G1008200,unique homolog,Multiple TE,3,495 3288,Chr01,MD01G1008200,multiple homolog,Multiple TE,3,495
3289,Chr01,MD01G1008300,multiple homolog,Multiple TE,6,516 3289,Chr01,MD01G1008300,multiple homolog,Multiple TE,6,516
3290,Chr01,MD01G1008400,multiple homolog,Multiple TE,4,495 3290,Chr01,MD01G1008400,multiple homolog,Multiple TE,4,495
3291,Chr01,MD01G1008500,unique homolog,Multiple TE,5,527 3291,Chr01,MD01G1008500,multiple homolog,Multiple TE,5,527
3292,Chr01,MD01G1008600,multiple homolog,Multiple TE,5,510 3292,Chr01,MD01G1008600,multiple homolog,Multiple TE,5,510
3293,Chr01,MD01G1008700,multiple homolog,Multiple TE,3,521 3293,Chr01,MD01G1008700,multiple homolog,Multiple TE,3,521
3294,Chr01,MD01G1008800,unique homolog,Multiple TE,6,491 3294,Chr01,MD01G1008800,multiple homolog,Multiple TE,6,491
3295,Chr01,MD01G1008900,multiple homolog,Multiple TE,4,476 3295,Chr01,MD01G1008900,multiple homolog,Multiple TE,4,476
3296,Chr01,MD01G1009000,unique homolog,Multiple TE,4,491 3296,Chr01,MD01G1009000,multiple homolog,Multiple TE,4,491
3297,Chr01,MD01G1009100,unique homolog,Multiple TE,3,512 3297,Chr01,MD01G1009100,unique homolog,Multiple TE,3,512
3298,Chr01,MD01G1009200,multiple homolog,Multiple TE,5,485 3298,Chr01,MD01G1009200,multiple homolog,Multiple TE,5,485
3299,Chr01,MD01G1009300,multiple homolog,Multiple TE,5,499 3299,Chr01,MD01G1009300,multiple homolog,Multiple TE,5,499
...@@ -3315,13 +3315,13 @@ ...@@ -3315,13 +3315,13 @@
3313,Chr01,MD01G1010700,multiple homolog,Multiple TE,2,498 3313,Chr01,MD01G1010700,multiple homolog,Multiple TE,2,498
3314,Chr01,MD01G1010800,multiple homolog,Multiple TE,3,502 3314,Chr01,MD01G1010800,multiple homolog,Multiple TE,3,502
3315,Chr01,MD01G1010900,unique homolog,Multiple TE,2,500 3315,Chr01,MD01G1010900,unique homolog,Multiple TE,2,500
3316,Chr01,MD01G1011000,multiple homolog,Multiple TE,4,499 3316,Chr01,MD01G1011000,singleton,Multiple TE,4,499
3317,Chr01,MD01G1011100,multiple homolog,Multiple TE,3,520 3317,Chr01,MD01G1011100,singleton,Multiple TE,3,520
3318,Chr01,MD01G1011200,unique homolog,Multiple TE,5,484 3318,Chr01,MD01G1011200,unique homolog,Multiple TE,5,484
3319,Chr01,MD01G1011300,multiple homolog,Multiple TE,4,492 3319,Chr01,MD01G1011300,singleton,Multiple TE,4,492
3320,Chr01,MD01G1011400,unique homolog,Multiple TE,4,513 3320,Chr01,MD01G1011400,unique homolog,Multiple TE,4,513
3321,Chr01,MD01G1011500,unique homolog,Multiple TE,3,501 3321,Chr01,MD01G1011500,unique homolog,Multiple TE,3,501
3322,Chr01,MD01G1011600,multiple homolog,Multiple TE,5,516 3322,Chr01,MD01G1011600,singleton,Multiple TE,5,516
3323,Chr01,MD01G1011700,multiple homolog,Multiple TE,4,493 3323,Chr01,MD01G1011700,multiple homolog,Multiple TE,4,493
3324,Chr01,MD01G1011800,unique homolog,Multiple TE,6,513 3324,Chr01,MD01G1011800,unique homolog,Multiple TE,6,513
3325,Chr01,MD01G1011900,multiple homolog,Multiple TE,5,502 3325,Chr01,MD01G1011900,multiple homolog,Multiple TE,5,502
...@@ -3331,7 +3331,7 @@ ...@@ -3331,7 +3331,7 @@
3329,Chr01,MD01G1012300,multiple homolog,Multiple TE,7,481 3329,Chr01,MD01G1012300,multiple homolog,Multiple TE,7,481
3330,Chr01,MD01G1012400,unique homolog,Multiple TE,4,526 3330,Chr01,MD01G1012400,unique homolog,Multiple TE,4,526
3331,Chr01,MD01G1012500,multiple homolog,Multiple TE,2,512 3331,Chr01,MD01G1012500,multiple homolog,Multiple TE,2,512
3332,Chr01,MD01G1012600,singleton,Multiple TE,4,476 3332,Chr01,MD01G1012600,multiple homolog,Multiple TE,4,476
3333,Chr01,MD01G1012700,unique homolog,Multiple TE,5,489 3333,Chr01,MD01G1012700,unique homolog,Multiple TE,5,489
3334,Chr01,MD01G1012800,multiple homolog,Multiple TE,7,508 3334,Chr01,MD01G1012800,multiple homolog,Multiple TE,7,508
3335,Chr01,MD01G1012900,multiple homolog,Multiple TE,5,507 3335,Chr01,MD01G1012900,multiple homolog,Multiple TE,5,507
...@@ -3389,147 +3389,147 @@ ...@@ -3389,147 +3389,147 @@
3387,Chr01,MD01G1018100,unique homolog,Multiple TE,5,494 3387,Chr01,MD01G1018100,unique homolog,Multiple TE,5,494
3388,Chr01,MD01G1018200,multiple homolog,Multiple TE,6,499 3388,Chr01,MD01G1018200,multiple homolog,Multiple TE,6,499
3389,Chr01,MD01G1018300,multiple homolog,Multiple TE,6,482 3389,Chr01,MD01G1018300,multiple homolog,Multiple TE,6,482
3390,Chr01,MD01G1018400,unique homolog,Multiple TE,3,503 3390,Chr01,MD01G1018400,multiple homolog,Multiple TE,3,503
3391,Chr01,MD01G1018500,multiple homolog,Multiple TE,6,507 3391,Chr01,MD01G1018500,multiple homolog,Multiple TE,6,507
3392,Chr01,MD01G1018600,unique homolog,Multiple TE,7,520 3392,Chr01,MD01G1018600,multiple homolog,Multiple TE,7,520
3393,Chr01,MD01G1018700,unique homolog,Multiple TE,5,493 3393,Chr01,MD01G1018700,multiple homolog,Multiple TE,5,493
3394,Chr01,MD01G1018800,multiple homolog,Multiple TE,5,499 3394,Chr01,MD01G1018800,multiple homolog,Multiple TE,5,499
3395,Chr01,MD01G1018900,multiple homolog,Multiple TE,4,481 3395,Chr01,MD01G1018900,multiple homolog,Multiple TE,4,481
3396,Chr01,MD01G1019000,unique homolog,Multiple TE,5,487 3396,Chr01,MD01G1019000,multiple homolog,Multiple TE,5,487
3397,Chr01,MD01G1019100,multiple homolog,Multiple TE,2,477 3397,Chr01,MD01G1019100,multiple homolog,Multiple TE,2,477
3398,Chr01,MD01G1019200,unique homolog,Multiple TE,5,521 3398,Chr01,MD01G1019200,multiple homolog,Multiple TE,5,521
3399,Chr01,MD01G1019300,multiple homolog,Multiple TE,7,506 3399,Chr01,MD01G1019300,multiple homolog,Multiple TE,7,506
3400,Chr01,MD01G1019400,multiple homolog,Multiple TE,5,493 3400,Chr01,MD01G1019400,multiple homolog,Multiple TE,5,493
3401,Chr01,MD01G1019500,unique homolog,Multiple TE,5,500 3401,Chr01,MD01G1019500,multiple homolog,Multiple TE,5,500
3402,Chr01,MD01G1019600,multiple homolog,Multiple TE,2,496 3402,Chr01,MD01G1019600,multiple homolog,Multiple TE,2,496
3403,Chr01,MD01G1019700,unique homolog,Multiple TE,5,498 3403,Chr01,MD01G1019700,multiple homolog,Multiple TE,5,498
3404,Chr01,MD01G1019800,unique homolog,Multiple TE,2,495 3404,Chr01,MD01G1019800,multiple homolog,Multiple TE,2,495
3405,Chr01,MD01G1019900,multiple homolog,Multiple TE,5,506 3405,Chr01,MD01G1019900,multiple homolog,Multiple TE,5,506
3406,Chr01,MD01G1020000,multiple homolog,Multiple TE,6,502 3406,Chr01,MD01G1020000,multiple homolog,Multiple TE,6,502
3407,Chr01,MD01G1020100,unique homolog,Multiple TE,7,494 3407,Chr01,MD01G1020100,multiple homolog,Multiple TE,7,494
3408,Chr01,MD01G1020200,multiple homolog,Multiple TE,3,509 3408,Chr01,MD01G1020200,multiple homolog,Multiple TE,3,509
3409,Chr01,MD01G1020300,multiple homolog,Multiple TE,7,514 3409,Chr01,MD01G1020300,multiple homolog,Multiple TE,7,514
3410,Chr01,MD01G1020400,unique homolog,Multiple TE,6,490 3410,Chr01,MD01G1020400,multiple homolog,Multiple TE,6,490
3411,Chr01,MD01G1020500,multiple homolog,Multiple TE,2,510 3411,Chr01,MD01G1020500,multiple homolog,Multiple TE,2,510
3412,Chr01,MD01G1020600,multiple homolog,Multiple TE,6,481 3412,Chr01,MD01G1020600,multiple homolog,Multiple TE,6,481
3413,Chr01,MD01G1020700,unique homolog,Multiple TE,6,490 3413,Chr01,MD01G1020700,multiple homolog,Multiple TE,6,490
3414,Chr01,MD01G1020800,multiple homolog,Multiple TE,3,508 3414,Chr01,MD01G1020800,multiple homolog,Multiple TE,3,508
3415,Chr01,MD01G1020900,unique homolog,Multiple TE,4,478 3415,Chr01,MD01G1020900,multiple homolog,Multiple TE,4,478
3416,Chr01,MD01G1021000,unique homolog,Multiple TE,6,498 3416,Chr01,MD01G1021000,multiple homolog,Multiple TE,6,498
3417,Chr01,MD01G1021100,multiple homolog,Multiple TE,5,469 3417,Chr01,MD01G1021100,multiple homolog,Multiple TE,5,469
3418,Chr01,MD01G1021200,multiple homolog,Multiple TE,2,511 3418,Chr01,MD01G1021200,multiple homolog,Multiple TE,2,511
3419,Chr01,MD01G1021300,unique homolog,Multiple TE,6,509 3419,Chr01,MD01G1021300,multiple homolog,Multiple TE,6,509
3420,Chr01,MD01G1021400,multiple homolog,Multiple TE,3,486 3420,Chr01,MD01G1021400,multiple homolog,Multiple TE,3,486
3421,Chr01,MD01G1021500,multiple homolog,Multiple TE,5,491 3421,Chr01,MD01G1021500,multiple homolog,Multiple TE,5,491
3422,Chr01,MD01G1021600,unique homolog,Multiple TE,5,509 3422,Chr01,MD01G1021600,multiple homolog,Multiple TE,5,509
3423,Chr01,MD01G1021700,multiple homolog,Multiple TE,4,487 3423,Chr01,MD01G1021700,multiple homolog,Multiple TE,4,487
3424,Chr01,MD01G1021800,multiple homolog,,5,492 3424,Chr01,MD01G1021800,multiple homolog,,5,492
3425,Chr01,MD01G1021900,unique homolog,Multiple TE,3,481 3425,Chr01,MD01G1021900,multiple homolog,Multiple TE,3,481
3426,Chr01,MD01G1022000,multiple homolog,Multiple TE,6,492 3426,Chr01,MD01G1022000,multiple homolog,Multiple TE,6,492
3427,Chr01,MD01G1022100,unique homolog,Multiple TE,6,505 3427,Chr01,MD01G1022100,multiple homolog,Multiple TE,6,505
3428,Chr01,MD01G1022200,unique homolog,Multiple TE,5,501 3428,Chr01,MD01G1022200,multiple homolog,Multiple TE,5,501
3429,Chr01,MD01G1022300,multiple homolog,Multiple TE,6,507 3429,Chr01,MD01G1022300,multiple homolog,Multiple TE,6,507
3430,Chr01,MD01G1022400,multiple homolog,Multiple TE,7,508 3430,Chr01,MD01G1022400,multiple homolog,Multiple TE,7,508
3431,Chr01,MD01G1022500,unique homolog,Multiple TE,6,492 3431,Chr01,MD01G1022500,multiple homolog,Multiple TE,6,492
3432,Chr01,MD01G1022600,multiple homolog,Multiple TE,7,496 3432,Chr01,MD01G1022600,multiple homolog,Multiple TE,7,496
3433,Chr01,MD01G1022700,multiple homolog,Multiple TE,4,508 3433,Chr01,MD01G1022700,multiple homolog,Multiple TE,4,508
3434,Chr01,MD01G1022800,unique homolog,Multiple TE,3,515 3434,Chr01,MD01G1022800,multiple homolog,Multiple TE,3,515
3435,Chr01,MD01G1022900,multiple homolog,Multiple TE,7,489 3435,Chr01,MD01G1022900,multiple homolog,Multiple TE,7,489
3436,Chr01,MD01G1023000,multiple homolog,Multiple TE,5,517 3436,Chr01,MD01G1023000,multiple homolog,Multiple TE,5,517
3437,Chr01,MD01G1023100,unique homolog,Multiple TE,6,479 3437,Chr01,MD01G1023100,multiple homolog,Multiple TE,6,479
3438,Chr01,MD01G1023200,multiple homolog,Multiple TE,3,495 3438,Chr01,MD01G1023200,multiple homolog,Multiple TE,3,495
3439,Chr01,MD01G1023300,unique homolog,Multiple TE,6,479 3439,Chr01,MD01G1023300,multiple homolog,Multiple TE,6,479
3440,Chr01,MD01G1023400,unique homolog,Multiple TE,4,511 3440,Chr01,MD01G1023400,multiple homolog,Multiple TE,4,511
3441,Chr01,MD01G1023500,multiple homolog,Multiple TE,5,498 3441,Chr01,MD01G1023500,multiple homolog,Multiple TE,5,498
3442,Chr01,MD01G1023600,multiple homolog,Multiple TE,7,507 3442,Chr01,MD01G1023600,multiple homolog,Multiple TE,7,507
3443,Chr01,MD01G1023700,unique homolog,Multiple TE,2,505 3443,Chr01,MD01G1023700,multiple homolog,Multiple TE,2,505
3444,Chr01,MD01G1023800,multiple homolog,Multiple TE,5,504 3444,Chr01,MD01G1023800,multiple homolog,Multiple TE,5,504
3445,Chr01,MD01G1023900,multiple homolog,Multiple TE,4,509 3445,Chr01,MD01G1023900,multiple homolog,Multiple TE,4,509
3446,Chr01,MD01G1024000,unique homolog,Multiple TE,4,510 3446,Chr01,MD01G1024000,multiple homolog,Multiple TE,4,510
3447,Chr01,MD01G1024100,multiple homolog,Multiple TE,6,513 3447,Chr01,MD01G1024100,multiple homolog,Multiple TE,6,513
3448,Chr01,MD01G1024200,multiple homolog,Multiple TE,5,512 3448,Chr01,MD01G1024200,multiple homolog,Multiple TE,5,512
3449,Chr01,MD01G1024300,unique homolog,Multiple TE,6,502 3449,Chr01,MD01G1024300,multiple homolog,Multiple TE,6,502
3450,Chr01,MD01G1024400,multiple homolog,Multiple TE,3,502 3450,Chr01,MD01G1024400,multiple homolog,Multiple TE,3,502
3451,Chr01,MD01G1024500,unique homolog,Multiple TE,4,503 3451,Chr01,MD01G1024500,multiple homolog,Multiple TE,4,503
3452,Chr01,MD01G1024600,unique homolog,Multiple TE,5,500 3452,Chr01,MD01G1024600,multiple homolog,Multiple TE,5,500
3453,Chr01,MD01G1024700,multiple homolog,Multiple TE,2,496 3453,Chr01,MD01G1024700,multiple homolog,Multiple TE,2,496
3454,Chr01,MD01G1024800,multiple homolog,Multiple TE,3,503 3454,Chr01,MD01G1024800,multiple homolog,Multiple TE,3,503
3455,Chr01,MD01G1024900,unique homolog,Multiple TE,3,488 3455,Chr01,MD01G1024900,multiple homolog,Multiple TE,3,488
3456,Chr01,MD01G1025000,multiple homolog,Multiple TE,4,523 3456,Chr01,MD01G1025000,multiple homolog,Multiple TE,4,523
3457,Chr01,MD01G1025100,multiple homolog,Multiple TE,2,500 3457,Chr01,MD01G1025100,multiple homolog,Multiple TE,2,500
3458,Chr01,MD01G1025200,unique homolog,Multiple TE,3,504 3458,Chr01,MD01G1025200,multiple homolog,Multiple TE,3,504
3459,Chr01,MD01G1025300,multiple homolog,Multiple TE,5,475 3459,Chr01,MD01G1025300,multiple homolog,Multiple TE,5,475
3460,Chr01,MD01G1025400,multiple homolog,Multiple TE,4,486 3460,Chr01,MD01G1025400,multiple homolog,Multiple TE,4,486
3461,Chr01,MD01G1025500,unique homolog,Multiple TE,4,501 3461,Chr01,MD01G1025500,multiple homolog,Multiple TE,4,501
3462,Chr01,MD01G1025600,multiple homolog,Multiple TE,2,505 3462,Chr01,MD01G1025600,multiple homolog,Multiple TE,2,505
3463,Chr01,MD01G1025700,unique homolog,Multiple TE,6,496 3463,Chr01,MD01G1025700,multiple homolog,Multiple TE,6,496
3464,Chr01,MD01G1025800,unique homolog,Multiple TE,6,493 3464,Chr01,MD01G1025800,multiple homolog,Multiple TE,6,493
3465,Chr01,MD01G1025900,multiple homolog,Multiple TE,6,490 3465,Chr01,MD01G1025900,multiple homolog,Multiple TE,6,490
3466,Chr01,MD01G1026000,multiple homolog,Multiple TE,3,490 3466,Chr01,MD01G1026000,multiple homolog,Multiple TE,3,490
3467,Chr01,MD01G1026100,unique homolog,Multiple TE,5,509 3467,Chr01,MD01G1026100,multiple homolog,Multiple TE,5,509
3468,Chr01,MD01G1026200,multiple homolog,Multiple TE,4,504 3468,Chr01,MD01G1026200,multiple homolog,Multiple TE,4,504
3469,Chr01,MD01G1026300,multiple homolog,Multiple TE,5,496 3469,Chr01,MD01G1026300,multiple homolog,Multiple TE,5,496
3470,Chr01,MD01G1026400,unique homolog,Multiple TE,5,507 3470,Chr01,MD01G1026400,multiple homolog,Multiple TE,5,507
3471,Chr01,MD01G1026500,multiple homolog,Multiple TE,2,497 3471,Chr01,MD01G1026500,multiple homolog,Multiple TE,2,497
3472,Chr01,MD01G1026600,multiple homolog,Multiple TE,2,501 3472,Chr01,MD01G1026600,multiple homolog,Multiple TE,2,501
3473,Chr01,MD01G1026700,unique homolog,Multiple TE,3,507 3473,Chr01,MD01G1026700,multiple homolog,Multiple TE,3,507
3474,Chr01,MD01G1026800,multiple homolog,Multiple TE,6,489 3474,Chr01,MD01G1026800,multiple homolog,Multiple TE,6,489
3475,Chr01,MD01G1026900,unique homolog,Multiple TE,5,517 3475,Chr01,MD01G1026900,multiple homolog,Multiple TE,5,517
3476,Chr01,MD01G1027000,unique homolog,Multiple TE,5,506 3476,Chr01,MD01G1027000,multiple homolog,Multiple TE,5,506
3477,Chr01,MD01G1027100,multiple homolog,Multiple TE,3,495 3477,Chr01,MD01G1027100,multiple homolog,Multiple TE,3,495
3478,Chr01,MD01G1027200,multiple homolog,Multiple TE,3,497 3478,Chr01,MD01G1027200,multiple homolog,Multiple TE,3,497
3479,Chr01,MD01G1027300,unique homolog,Multiple TE,4,496 3479,Chr01,MD01G1027300,multiple homolog,Multiple TE,4,496
3480,Chr01,MD01G1027400,multiple homolog,Multiple TE,5,502 3480,Chr01,MD01G1027400,multiple homolog,Multiple TE,5,502
3481,Chr01,MD01G1027500,multiple homolog,Multiple TE,4,526 3481,Chr01,MD01G1027500,multiple homolog,Multiple TE,4,526
3482,Chr01,MD01G1027600,unique homolog,Multiple TE,5,495 3482,Chr01,MD01G1027600,multiple homolog,Multiple TE,5,495
3483,Chr01,MD01G1027700,multiple homolog,Multiple TE,3,491 3483,Chr01,MD01G1027700,multiple homolog,Multiple TE,3,491
3484,Chr01,MD01G1027800,multiple homolog,Multiple TE,4,506 3484,Chr01,MD01G1027800,multiple homolog,Multiple TE,4,506
3485,Chr01,MD01G1027900,unique homolog,Multiple TE,5,506 3485,Chr01,MD01G1027900,multiple homolog,Multiple TE,5,506
3486,Chr01,MD01G1028000,multiple homolog,Multiple TE,6,505 3486,Chr01,MD01G1028000,multiple homolog,Multiple TE,6,505
3487,Chr01,MD01G1028100,unique homolog,Multiple TE,7,503 3487,Chr01,MD01G1028100,multiple homolog,Multiple TE,7,503
3488,Chr01,MD01G1028200,unique homolog,Multiple TE,6,491 3488,Chr01,MD01G1028200,multiple homolog,Multiple TE,6,491
3489,Chr01,MD01G1028300,multiple homolog,Multiple TE,5,521 3489,Chr01,MD01G1028300,multiple homolog,Multiple TE,5,521
3490,Chr01,MD01G1028400,multiple homolog,,5,503 3490,Chr01,MD01G1028400,multiple homolog,,5,503
3491,Chr01,MD01G1028500,unique homolog,Multiple TE,4,487 3491,Chr01,MD01G1028500,multiple homolog,Multiple TE,4,487
3492,Chr01,MD01G1028600,multiple homolog,Multiple TE,5,511 3492,Chr01,MD01G1028600,multiple homolog,Multiple TE,5,511
3493,Chr01,MD01G1028700,multiple homolog,Multiple TE,2,520 3493,Chr01,MD01G1028700,multiple homolog,Multiple TE,2,520
3494,Chr01,MD01G1028800,unique homolog,Multiple TE,7,516 3494,Chr01,MD01G1028800,multiple homolog,Multiple TE,7,516
3495,Chr01,MD01G1028900,multiple homolog,Multiple TE,3,508 3495,Chr01,MD01G1028900,multiple homolog,Multiple TE,3,508
3496,Chr01,MD01G1029000,multiple homolog,Multiple TE,2,482 3496,Chr01,MD01G1029000,multiple homolog,Multiple TE,2,482
3497,Chr01,MD01G1029100,unique homolog,Multiple TE,2,493 3497,Chr01,MD01G1029100,multiple homolog,Multiple TE,2,493
3498,Chr01,MD01G1029200,multiple homolog,Multiple TE,3,502 3498,Chr01,MD01G1029200,multiple homolog,Multiple TE,3,502
3499,Chr01,MD01G1029300,unique homolog,Multiple TE,4,506 3499,Chr01,MD01G1029300,multiple homolog,Multiple TE,4,506
3500,Chr01,MD01G1029400,unique homolog,Multiple TE,5,497 3500,Chr01,MD01G1029400,multiple homolog,Multiple TE,5,497
3501,Chr01,MD01G1029500,multiple homolog,Multiple TE,6,495 3501,Chr01,MD01G1029500,multiple homolog,Multiple TE,6,495
3502,Chr01,MD01G1029600,multiple homolog,Multiple TE,4,486 3502,Chr01,MD01G1029600,multiple homolog,Multiple TE,4,486
3503,Chr01,MD01G1029700,unique homolog,Multiple TE,4,484 3503,Chr01,MD01G1029700,multiple homolog,Multiple TE,4,484
3504,Chr01,MD01G1029800,multiple homolog,Multiple TE,4,480 3504,Chr01,MD01G1029800,multiple homolog,Multiple TE,4,480
3505,Chr01,MD01G1029900,multiple homolog,Multiple TE,7,484 3505,Chr01,MD01G1029900,multiple homolog,Multiple TE,7,484
3506,Chr01,MD01G1030000,unique homolog,Multiple TE,5,483 3506,Chr01,MD01G1030000,multiple homolog,Multiple TE,5,483
3507,Chr01,MD01G1030100,multiple homolog,Multiple TE,5,506 3507,Chr01,MD01G1030100,multiple homolog,Multiple TE,5,506
3508,Chr01,MD01G1030200,multiple homolog,Multiple TE,6,504 3508,Chr01,MD01G1030200,multiple homolog,Multiple TE,6,504
3509,Chr01,MD01G1030300,unique homolog,Multiple TE,7,505 3509,Chr01,MD01G1030300,multiple homolog,Multiple TE,7,505
3510,Chr01,MD01G1030400,multiple homolog,Multiple TE,5,505 3510,Chr01,MD01G1030400,multiple homolog,Multiple TE,5,505
3511,Chr01,MD01G1030500,unique homolog,Multiple TE,6,482 3511,Chr01,MD01G1030500,multiple homolog,Multiple TE,6,482
3512,Chr01,MD01G1030600,unique homolog,Multiple TE,4,503 3512,Chr01,MD01G1030600,multiple homolog,Multiple TE,4,503
3513,Chr01,MD01G1030700,multiple homolog,Multiple TE,6,490 3513,Chr01,MD01G1030700,multiple homolog,Multiple TE,6,490
3514,Chr01,MD01G1030800,multiple homolog,Multiple TE,6,484 3514,Chr01,MD01G1030800,multiple homolog,Multiple TE,6,484
3515,Chr01,MD01G1030900,unique homolog,Multiple TE,6,502 3515,Chr01,MD01G1030900,multiple homolog,Multiple TE,6,502
3516,Chr01,MD01G1031000,multiple homolog,Multiple TE,7,480 3516,Chr01,MD01G1031000,multiple homolog,Multiple TE,7,480
3517,Chr01,MD01G1031100,multiple homolog,Multiple TE,5,479 3517,Chr01,MD01G1031100,multiple homolog,Multiple TE,5,479
3518,Chr01,MD01G1031200,unique homolog,Multiple TE,3,492 3518,Chr01,MD01G1031200,multiple homolog,Multiple TE,3,492
3519,Chr01,MD01G1031300,multiple homolog,Multiple TE,3,494 3519,Chr01,MD01G1031300,multiple homolog,Multiple TE,3,494
3520,Chr01,MD01G1031400,multiple homolog,Multiple TE,5,512 3520,Chr01,MD01G1031400,multiple homolog,Multiple TE,5,512
3521,Chr01,MD01G1031500,unique homolog,Multiple TE,3,492 3521,Chr01,MD01G1031500,multiple homolog,Multiple TE,3,492
3522,Chr01,MD01G1031600,multiple homolog,Multiple TE,6,496 3522,Chr01,MD01G1031600,multiple homolog,Multiple TE,6,496
3523,Chr01,MD01G1031700,unique homolog,Multiple TE,3,499 3523,Chr01,MD01G1031700,multiple homolog,Multiple TE,3,499
3524,Chr01,MD01G1031800,unique homolog,Multiple TE,3,493 3524,Chr01,MD01G1031800,multiple homolog,Multiple TE,3,493
3525,Chr01,MD01G1031900,multiple homolog,Multiple TE,7,499 3525,Chr01,MD01G1031900,multiple homolog,Multiple TE,7,499
3526,Chr01,MD01G1032000,multiple homolog,Multiple TE,2,507 3526,Chr01,MD01G1032000,multiple homolog,Multiple TE,2,507
3527,Chr01,MD01G1032100,unique homolog,Multiple TE,6,493 3527,Chr01,MD01G1032100,multiple homolog,Multiple TE,6,493
3528,Chr01,MD01G1032200,multiple homolog,Multiple TE,2,509 3528,Chr01,MD01G1032200,multiple homolog,Multiple TE,2,509
3529,Chr01,MD01G1032300,multiple homolog,Multiple TE,6,505 3529,Chr01,MD01G1032300,multiple homolog,Multiple TE,6,505
3530,Chr01,MD01G1032400,unique homolog,Multiple TE,4,496 3530,Chr01,MD01G1032400,multiple homolog,Multiple TE,4,496
3531,Chr01,MD01G1032500,multiple homolog,Multiple TE,5,487 3531,Chr01,MD01G1032500,multiple homolog,Multiple TE,5,487
3532,Chr01,MD01G1032600,multiple homolog,Multiple TE,6,513 3532,Chr01,MD01G1032600,multiple homolog,Multiple TE,6,513
3533,Chr01,MD01G1032700,unique homolog,Multiple TE,5,502 3533,Chr01,MD01G1032700,unique homolog,Multiple TE,5,502
......
results/analyses_test/fisher_exact.csv
+ 4
− 2
View file @ aef04521
,Variables,duo_analysis,Odds ratio,p-value,interpretation ,Variables,duo_factor_analysis,duo_variable,Odds ratio,p-value,duo_interpretation,variable_interpretation
0,type dupli,Chr01 and Chr02,None,<10-6,Significant 0,type dupli,Chr01 and Chr02,multiple homolog and singleton,0.0,1.1e-05,Significant,Significant
1,type dupli,Chr01 and Chr02,multiple homolog and unique homolog,0.318754,<10-6,Significant,Significant
2,type dupli,Chr01 and Chr02,singleton and unique homolog,inf,0.009415,Significant,Significant
results/analyses_test/qualitative_hypergeometric.csv
+ 6
− 6
View file @ aef04521
,chr,variables,modalities,cla/mod,mod/cla,global,p-value,v-test,interpretation ,chr,variables,modalities,cla/mod,mod/cla,global,p-value,v-test,interpretation
0,Chr01,type dupli,unique homolog,65.1976669,41.8817652,27.50936,<10-6,20.8447884,over-represented 0,Chr01,type dupli,unique homolog,63.2694938,38.5095754,26.0652523,<10-6,18.3324054,over-represented
1,Chr01,type dupli,multiple homolog,34.2040414,57.785179,72.3480121,<10-6,-21.117166,under-represented 1,Chr01,type dupli,multiple homolog,35.4448743,61.0324729,73.7386343,<10-6,-18.7110892,under-represented
2,Chr01,type dupli,singleton,100.0,0.3330558,0.1426279,0.0011236,3.2576032,over-represented 2,Chr01,type dupli,singleton,100.0,0.4579517,0.1961134,8.77e-05,3.9223954,over-represented
3,Chr01,type TE,Multiple TE,42.4553813,98.0432973,98.8946336,<10-6,-5.3466735,under-represented 3,Chr01,type TE,Multiple TE,42.4553813,98.0432973,98.8946336,<10-6,-5.3466735,under-represented
4,Chr01,type TE,missing values,40.0,0.4163197,0.4457122,0.7864516,Not significant,Not significant 4,Chr01,type TE,missing values,40.0,0.4163197,0.4457122,0.7864516,Not significant,Not significant
5,Chr01,type TE,No TE,100.0,0.5828476,0.2495989,6.8e-06,4.4990299,over-represented 5,Chr01,type TE,No TE,100.0,0.5828476,0.2495989,6.8e-06,4.4990299,over-represented
6,Chr01,type TE,One TE,100.0,0.9575354,0.4100553,<10-6,5.9219821,over-represented 6,Chr01,type TE,One TE,100.0,0.9575354,0.4100553,<10-6,5.9219821,over-represented
7,Chr02,type dupli,unique homolog,34.8023331,16.7446211,27.50936,<10-6,-20.8721322,under-represented 7,Chr02,type dupli,unique homolog,36.7305062,16.7446211,26.0652523,<10-6,-18.3684546,under-represented
8,Chr02,type dupli,multiple homolog,65.7959586,83.2553789,72.3480121,<10-6,21.0905244,over-represented 8,Chr02,type dupli,multiple homolog,64.5551257,83.2553789,73.7386343,<10-6,18.6764213,over-represented
9,Chr02,type dupli,singleton,0.0,0.0,0.1426279,0.0238804,-2.2590484,under-represented 9,Chr02,type dupli,singleton,0.0,0.0,0.1961134,0.0043259,-2.8533663,under-represented
10,Chr02,type TE,Multiple TE,57.5446187,99.5322732,98.8946336,<10-6,5.2631827,over-represented 10,Chr02,type TE,Multiple TE,57.5446187,99.5322732,98.8946336,<10-6,5.2631827,over-represented
11,Chr02,type TE,missing values,60.0,0.4677268,0.4457122,0.78645,Not significant,Not significant 11,Chr02,type TE,missing values,60.0,0.4677268,0.4457122,0.78645,Not significant,Not significant
12,Chr02,type TE,No TE,0.0,0.0,0.2495989,0.0007952,-3.354451,under-represented 12,Chr02,type TE,No TE,0.0,0.0,0.2495989,0.0007952,-3.354451,under-represented
......
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