Merge branch Issues#143 with master (!79) · Merge requests · genotoul-bioinfo / ng6 · GitLab

Romain Therville requested to merge Issues#143_debug_init_illumina10X into master Jan 08, 2020

It's due to bug with the older version :

just R1 and R2 files are used for analyses (ContaminationSearch, FastQC etc ... )
R1, R2 and I1 after illuminaFilter if it's done are saved
not impacted illlumina_qc analysis

Change :

ng6_workflow
add new function in utils for catch R1,R2 and I1 files after illuminafilter
add new files to manage in smarty viszualisation

(Replaces the merge !68 (closed))