add total/mean values for demultiplex_ont

ui/nG6/pi1/analyzes/Demultiplex_ONT.tpl

@@ -36,6 +36,12 @@ along with this program.  If not, see <http://www.gnu.org/licenses/>.
 	{assign var="stats_metrics" value=$analyse_results["stats_metrics"]|@ksort}
 	{assign var="stats_headers" value=','|explode:$analyse_results["metrics"].stats_names.headers}
 	{assign var="stats_names" value=['format' => 'Format','num_seqs' => 'NB Sequences','sum_len' => 'Total Length','avg_len' => 'Mean Length','min_len' => 'Min Length','max_len' => 'Max Length','N50' => 'N50']}
+	{assign var="totalNbSequences" value=0}
+	{assign var="totalLength" value=0}
+	{assign var="totalAvgLength" value=0}
+	{assign var="totalMinLength" value=0}
+	{assign var="totalMaxLength" value=0}
+	{assign var="totalN50" value=0}
 	
 	<table id="ont_stats_datatable" class="table table-striped table-bordered dataTable analysis-result-table" style="white-space:nowrap;">
 		<thead>
@@ -45,14 +51,45 @@ along with this program.  If not, see <http://www.gnu.org/licenses/>.
 			{/foreach}
 		</thead>
 		<tbody>
-			{foreach from=$stats_metrics key=fastq item=fastq_metrics}
-				<tr><th>{$fastq}</th>
-				{foreach from=$stats_headers key=k item=stat}
-					<td>{$fastq_metrics[$stat]}</td>
-				{/foreach}
-				</tr>
-			{/foreach}
-		</tbody>
+                        {foreach from=$stats_metrics key=fastq item=fastq_metrics}
+                                <tr><th>{$fastq}</th>
+                                {foreach from=$stats_headers key=k item=stat}
+                                        {if $stat == "num_seqs"}{$totalNbSequences=$totalNbSequences+$fastq_metrics[$stat]|replace:',':''|replace:'.':','}{/if}
+                                        {if $stat == "sum_len"}{$totalLength=$totalLength+$fastq_metrics[$stat]|replace:',':''|replace:'.':','}{/if}
+                                        {if $stat == "avg_len"}{$totalAvgLength=$totalAvgLength+$fastq_metrics[$stat]|replace:',':''|replace:'.':','}{/if}
+                                        {if $stat == "min_len"}{$totalMinLength=$totalMinLength+$fastq_metrics[$stat]|replace:',':''|replace:'.':','}{/if}
+                                        {if $stat == "max_len"}{$totalMaxLength=$totalMaxLength+$fastq_metrics[$stat]|replace:',':''|replace:'.':','}{/if}
+                                        {if $stat == "N50"}{$totalN50=$totalN50+$fastq_metrics[$stat]|replace:',':''|replace:'.':','}{/if}
+                                        <td>{$fastq_metrics[$stat]|replace:',':''|replace:'.':','|number_format:0:' ':' '}</td>
+                                {/foreach}
+                                </tr>
+                        {/foreach}
+                </tbody>
+                {if $analyse_results|@count > 1 }
+                <tfoot>
+                        <tr>
+                                <th></th>
+                                <th>Total</th>
+                                <th>{$totalNbSequences|number_format:0:' ':' '}</th>
+                                <th>{$totalLength|number_format:0:' ':' '}</th>
+                                <th></th>
+                                <th></th>
+                                <th></th>
+                                <th></th>
+                        </tr>
+                        <tr>
+                                <th></th>
+                                <th>Mean</th>
+                                <th>{($totalNbSequences/($stats_metrics|@count))|number_format:0:' ':' '}</th>
+                                <th>{($totalLength/($stats_metrics|@count))|number_format:0:' ':' '}</th>
+                                <th>{($totalAvgLength/($stats_metrics|@count))|number_format:0:' ':' '}</th>
+                                <th>{($totalMinLength/($stats_metrics|@count))|number_format:0:' ':' '}</th>
+                                <th>{($totalMaxLength/($stats_metrics|@count))|number_format:0:' ':' '}</th>
+                                <th>{($totalN50/($stats_metrics|@count))|number_format:0:' ':' '}</th>
+                        </tr>
+                </tfoot>
+
+		{/if}
 	</table>
 
 {* Help block *}