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Formation et tp SLURM pour la FCC 2022 à Montpellier

Some templates useful for Gitlab CI Yaml scripts.

Ensemble de scripts utilisés au LRF pour traiter les données d'amplicon sequencing 16S et ITS.

Pipeline Nextflow

LESSEM internal package for simulation of forest dynamic depending on climatic variables

mixKernel is a multiple kernel framework that allows to integrate multiple datasets of various types into a single analysis. The package is published on CRAN: https://cran.r-project.org/package=mixKernel

Life game (Conway) using vle::discrete_time cells and vle.generic.builder Builder model to generate cells and their connexions

UTOPIA: an automatically UpdaTed, cOmPlete and consistent ITS reference dAtabase

Some scripts for the methylation analysis of the ChickStress project.

On-line doctoral training on EMULSION

Link to running app: https://matrixapp.sk8.inrae.fr

MATRiX is a shiny application dedicated to Mining and Analysis of Transcriptomics data using common biostatistic result files (statistical test result table, normalised data table and samples-groups information). This application helps biologists to perform data exploration with PCA, Venn diagrams, StripCharts, volcanoplots, and Heatmap clustering of genes lists (selecting statistical thresholds) and functional enrichment analyses using a connection to enrichr. https://matrixapp.sk8.inrae.fr