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metagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. Since release 2.3, binning step with the possibility of cross-alignment is included. It has been developed in collaboration with several CATI BIOS4biol agents. Funded by Antiselfish Project (Labex Ecofect), ExpoMicoPig project (France Futur elevage) and SeqOccIn project (CPER - Occitanie Toulouse / FEDER), ATB_Biofilm funded by PNREST Anses, France genomique (ANR-10-INBS-09-08) and Resalab Ouest.
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Dépôt public de documentations pour les utilisateurs de ForgeMIA. Contact : support-forgemia@inra.fr
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Formation et tp SLURM pour la FCC 2022 à Montpellier
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FAIDARE: FAIR Data-finder for Agronomic Research
It provides web services (based on the BrAPI standard) and a web interface with easy to use filters to facilitates the access to plant datasets from a federation of sources.
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Ontologies
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DataDiscovery aims at providing researchers a simple and fast access to relevant biological data using specific keywords and easy to use filters.
This tool is expected to be easily customizable for specific filters, environments, or data schemas.
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Dotplot large Genomes in an Interactive, Efficient and Simple way
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Traduction française des FAIR4RS Principles (voir README)
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Organisation d'un bootcamp autour de l'intégration et la visualisation de données avec Neo4J, adossé en amont d'une formation Neo4J en ligne.
Site web : https://work4graph.pages.mia.inra.fr/bootcamp-neo4j-2022/