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metagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. It has been developed in collaboration with several CATI BIOS4biol agents. Funded by Antiselfish Project (Labex Ecofect), ExpoMicoPig project (France Futur elevage) and SeqOccIn project (CPER - Occitanie Toulouse / FEDER).
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Dépôt public de documentations pour les utilisateurs de ForgeMIA. Contact : support-forgemia@inra.fr
documentation doc support+ 1 more -
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Ontologies
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FAIDARE: FAIR Data-finder for Agronomic Research
It provides web services (based on the BrAPI standard) and a web interface with easy to use filters to facilitates the access to plant datasets from a federation of sources.
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DataDiscovery aims at providing researchers a simple and fast access to relevant biological data using specific keywords and easy to use filters.
This tool is expected to be easily customizable for specific filters, environments, or data schemas.
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Dotplot large Genomes in an Interactive, Efficient and Simple way
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List of workflows (nextflow/snakemake) tested for Genotoul Cluster.
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Ensemble de scripts utilisés au LRF pour traiter les données d'amplicon sequencing 16S et ITS.
amplicon seq... ITS 16S+ 3 more -
A quick and dirty beamer theme for INRAE
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