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Still under development

Nextflow pipeline creating a Neo4j Ortho_KB database.

metagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. It has been developed in collaboration with several CATI BIOS4biol agents.

Nextflow pipeline to extract syntenic blocks using the MCScanX program.

Pipeline Nextflow

Nextflow GenomOrder pipeline

Cours accessible à https://genotoul-bioinfo.pages.mia.inra.fr/use-nextflow-nfcore-course/

Portabilité et mises en commun de workflows